RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 PPP3CAQ08209 521 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 DUSP4Q13115 394 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 ADAM9Q13443 819 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 MORC3Q14149 939 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 SURF1Q15526 300 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 SLC5A9Q2M3M2 681 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 SLC39A12Q504Y0 691 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 LIN9Q5TKA1 542 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 CENPPQ6IPU0 288 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 LIMS2Q7Z4I7 341 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 ELOA2Q8IYF1 753 aaPredicted RBP11.52□□□□□ -0.57
HMGA2-209ENST00000539662 TCEAL8Q8IYN2 117 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 LRRC52Q8N7C0 313 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 STKLD1Q8NE28 680 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 ITFG1Q8TB96 612 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 GOLGA5Q8TBA6 731 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 KBTBD7Q8WVZ9 684 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 ZNF560Q96MR9 790 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 NECTIN4Q96NY8 510 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 MRPL45Q9BRJ2 306 aaKnown RBP11.52□□□□□ -0.57
HMGA2-209ENST00000539662 ZCWPW1Q9H0M4 648 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 PIDD1Q9HB75 910 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 GDAP2Q9NXN4 497 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 CEP72Q9P209 647 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 LIMD1Q9UGP4 676 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 INSL5Q9Y5Q6 135 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.52□□□□□ -0.57
HMGA2-209ENST00000539662 CLUHO75153 1309 aa11.52□□□□□ -0.57
HMGA2-209ENST00000539662 ARHGEF37A1IGU5 675 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 FAM86C2PA6NEL3 165 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 OR6C75A6NL08 312 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 PRRG1O14668 218 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 ATP2C2O75185 946 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 PNPLA4P41247 253 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 CCR2P41597 374 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 TWF1Q12792 350 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 GPR17Q13304 367 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 NFIL3Q16649 462 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 COBLL1Q53SF7 1204 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 SPOPLQ6IQ16 392 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 CLEC17AQ6ZS10 378 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 CCDC149Q6ZUS6 474 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 GET4Q7L5D6 327 aaPredicted RBP11.51□□□□□ -0.57
HMGA2-209ENST00000539662 RSAD2Q8WXG1 361 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 TCEAL4Q96EI5 215 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 PKMYT1Q99640 499 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 DUSP9Q99956 384 aaKnown RBP11.51□□□□□ -0.57
HMGA2-209ENST00000539662 RHOBTB2Q9BYZ6 727 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 SDCBP2Q9H190 292 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 DNAJC25Q9H1X3 360 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 RMND1Q9NWS8 449 aa11.51□□□□□ -0.57
HMGA2-209ENST00000539662 DDX43Q9NXZ2 648 aaKnown RBP11.51□□□□□ -0.57
HMGA2-209ENST00000539662 AFF4Q9UHB7 1163 aaKnown RBP11.51□□□□□ -0.57
HMGA2-209ENST00000539662 MYBPHLA2RUH7 354 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 PI4K2BG5E9Z4 385 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 GABRDO14764 452 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 HUS1O60921 280 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 HNRNPA1P09651 372 aaKnown RBP eCLIP11.5□□□□□ -0.57
HMGA2-209ENST00000539662 GJA1P17302 382 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 HOXA9P31269 272 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 ELF1P32519 619 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 RAP1GAPP47736 663 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 GCLMP48507 274 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 GPR15P49685 360 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 VAMP7P51809 220 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 CDH8P55286 799 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 STX17P56962 302 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 BIRC3Q13489 604 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 MYBPC2Q14324 1141 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 UVSSAQ2YD98 709 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 SDHAF4Q5VUM1 108 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 TPGS2Q68CL5 300 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 KLHL10Q6JEL2 608 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 SV2AQ7L0J3 742 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 METTL23Q86XA0 190 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 ZC3H3Q8IXZ2 948 aaKnown RBP11.5□□□□□ -0.57
HMGA2-209ENST00000539662 FAM186BQ8IYM0 893 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 ADGRF2Q8IZF7 708 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 GPR152Q8TDT2 470 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 ING5Q8WYH8 240 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 MED15Q96RN5 788 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 PI4K2AQ9BTU6 479 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 RPP25Q9BUL9 199 aaKnown RBP11.5□□□□□ -0.57
HMGA2-209ENST00000539662 MMRN2Q9H8L6 949 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 CRTAC1Q9NQ79 661 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 DPP7Q9UHL4 492 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 GTF3C4Q9UKN8 822 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 YIPF1Q9Y548 306 aa11.5□□□□□ -0.57
HMGA2-209ENST00000539662 PHACTR2O75167 634 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 MOSPD3O75425 235 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 KIF20AO95235 890 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 LRG1P02750 347 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 RHOP08100 348 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 PDGFRBP09619 1106 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 CEBPBP17676 345 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 ATF6P18850 670 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 PAX3P23760 479 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 FSHRP23945 695 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 CCNE1P24864 410 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms