RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 PRSS33Q8NF86 280 aa9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 BEST2Q8NFU1 509 aa9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 LNX1Q8TBB1 728 aaPredicted RBP9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 RABGGTAQ92696 567 aa9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 CERS4Q9HA82 394 aa9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 C1orf112Q9NSG2 853 aa9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 NXF1Q9UBU9 619 aaKnown RBP9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 UBQLN1Q9UMX0 589 aaKnown RBP9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 PPP2R2CQ9Y2T4 447 aa9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 GIT1Q9Y2X7 761 aa9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 NME7Q9Y5B8 376 aa9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 PTPRSQ13332 1948 aa9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 TTC3P53804 2025 aa9.83□□□□□ -0.84
RTN4IP1-204ENST00000539449 A0A087X0T9 212 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 RCCD1A6NED2 376 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 ARL5CA6NH57 179 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 DDX3XO00571 662 aaKnown RBP eCLIP9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 POMCP01189 267 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 CXCL10P02778 98 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 FAM228BP0C875 321 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 FGFR1P11362 822 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 RFX1P22670 979 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 RAB27AP51159 221 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 KIF11P52732 1056 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 PTPN5P54829 565 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 GFPT1Q06210 699 aaPredicted RBP9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 TDRD12Q587J7 1177 aaKnown RBP9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 CLLU1OSQ5K130 101 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 SLC24A5Q71RS6 500 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 OTOP2Q7RTS6 562 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 ERMP1Q7Z2K6 904 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 SLC47A2Q86VL8 602 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 PALB2Q86YC2 1186 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 WHAMMQ8TF30 809 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 SEPT8Q92599 483 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 HPDLQ96IR7 371 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 PPP1R13BQ96KQ4 1090 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 PCDHB18PQ96TA0 734 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 ZSWIM1Q9BR11 485 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 PAAF1Q9BRP4 392 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 BCO2Q9BYV7 579 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 NIF3L1Q9GZT8 377 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 NUCKS1Q9H1E3 243 aaKnown RBP9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 SMYD3Q9H7B4 428 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 RSAD1Q9HA92 442 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 NOCTQ9UK39 431 aaKnown RBP9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 ITGA11Q9UKX5 1188 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 NENFQ9UMX5 172 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 CNTN6Q9UQ52 1028 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 INPP5FQ9Y2H2 1132 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 DAAM1Q9Y4D1 1078 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 PCDHB4Q9Y5E5 795 aa9.82□□□□□ -0.84
RTN4IP1-204ENST00000539449 EPG5Q9HCE0 2579 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 COL4A4P53420 1690 aaPredicted RBP9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 SSU72P8A0A1W2PR75 194 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 EIF3CLB5ME19 914 aaKnown RBP9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 HCRTO43612 131 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 ZNF500O60304 480 aaPredicted RBP9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 CLSTN1O94985 981 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 LCA5LO95447 670 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 STAU1O95793 577 aaKnown RBP9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 CFHP08603 1231 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 KRT5P13647 590 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 CD58P19256 250 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 CYP3A5P20815 502 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 MSNP26038 577 aaKnown RBP9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 LRPAP1P30533 357 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 ATICP31939 592 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 ARHGAP25P42331 645 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 ORC1Q13415 861 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 WDR72Q3MJ13 1102 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 ZNF667Q5HYK9 610 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 TAF3Q5VWG9 929 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 CD300LGQ6UXG3 332 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.81□□□□□ -0.844e-6■■■■□ 20.5
RTN4IP1-204ENST00000539449 CCDC170Q8IYT3 715 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 RBBP8NLQ8NC74 664 aaPredicted RBP9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 SLC30A5Q8TAD4 765 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 DDX1Q92499 740 aaKnown RBP9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 TAF4BQ92750 862 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 PGBD4Q96DM1 585 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 CCDC42Q96M95 316 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 TWNKQ96RR1 684 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 EIF3CQ99613 913 aaKnown RBP9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 AGPAT1Q99943 283 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 VRTNQ9H8Y1 702 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 KCND1Q9NSA2 647 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 CISHQ9NSE2 258 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 TAS2R14Q9NYV8 317 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 TRIM10Q9UDY6 481 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 HMGXB4Q9UGU5 601 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 SLC4A7Q9Y6M7 1214 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 TRIOO75962 3097 aa9.81□□□□□ -0.84
RTN4IP1-204ENST00000539449 COL4A6Q14031 1691 aa9.8□□□□□ -0.84
RTN4IP1-204ENST00000539449 KMT2BQ9UMN6 2715 aaPredicted RBP9.8□□□□□ -0.84
RTN4IP1-204ENST00000539449 CASTOR2A6NHX0 329 aa9.8□□□□□ -0.84
RTN4IP1-204ENST00000539449 F8W810 466 aa9.8□□□□□ -0.84
RTN4IP1-204ENST00000539449 INPPL1O15357 1258 aa9.8□□□□□ -0.84
RTN4IP1-204ENST00000539449 NRDCO43847 1150 aa9.8□□□□□ -0.84
RTN4IP1-204ENST00000539449 AKR1B10O60218 316 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms