RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TAF4BQ92750 862 aa9.44□□□□□ -0.9
DDB1-213ENST00000539332 ANKRD36BP1Q96IX9 119 aa9.44□□□□□ -0.9
DDB1-213ENST00000539332 NOX5Q96PH1 765 aa9.44□□□□□ -0.9
DDB1-213ENST00000539332 ALS2CR12Q96Q35 445 aa9.44□□□□□ -0.9
DDB1-213ENST00000539332 TRIM6Q9C030 488 aaPredicted RBP9.44□□□□□ -0.9
DDB1-213ENST00000539332 PLEKHA5Q9HAU0 1116 aa9.44□□□□□ -0.9
DDB1-213ENST00000539332 ERVK-5Q9HDB9 667 aa9.44□□□□□ -0.9
DDB1-213ENST00000539332 CHST12Q9NRB3 414 aa9.44□□□□□ -0.9
DDB1-213ENST00000539332 DERAQ9Y315 318 aa9.44□□□□□ -0.9
DDB1-213ENST00000539332 ALPK3Q96L96 1907 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 SHOX2O60902 331 aaPredicted RBP9.43□□□□□ -0.9
DDB1-213ENST00000539332 CST3P01034 146 aaPredicted RBP9.43□□□□□ -0.9
DDB1-213ENST00000539332 TNNC2P02585 160 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 ATP1A1P05023 1023 aaKnown RBP9.43□□□□□ -0.9
DDB1-213ENST00000539332 NFICP08651 508 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 TMEM191BP0C7N4 346 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 PRLRP16471 622 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 TNFAIP3P21580 790 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 PDE6CP51160 858 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 GALCP54803 685 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 GYS2P54840 703 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 BPIFB4P59827 614 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 LRRC26Q2I0M4 334 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 SGSM1Q2NKQ1 1148 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 UBXN11Q5T124 520 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 JADE1Q6IE81 842 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 RPUSD2Q8IZ73 545 aaKnown RBP9.43□□□□□ -0.9
DDB1-213ENST00000539332 LRRC57Q8N9N7 239 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 PNKPQ96T60 521 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 PCDHB18PQ96TA0 734 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 BCO2Q9BYV7 579 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 IMPG2Q9BZV3 1241 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 NIF3L1Q9GZT8 377 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 NXF3Q9H4D5 531 aaKnown RBP9.43□□□□□ -0.9
DDB1-213ENST00000539332 FAM204AQ9H8W3 233 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 TAS2R14Q9NYV8 317 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 PUF60Q9UHX1 559 aaKnown RBP9.43□□□□□ -0.9
DDB1-213ENST00000539332 ATP11BQ9Y2G3 1177 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 PCDHB2Q9Y5E7 798 aa9.43□□□□□ -0.9
DDB1-213ENST00000539332 LAMA2P24043 3122 aaKnown RBP9.43□□□□□ -0.9
DDB1-213ENST00000539332 GRID2IPA4D2P6 1211 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 PHACTR2O75167 634 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 RTN2O75298 545 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 EN2P19622 333 aaPredicted RBP9.42□□□□□ -0.9
DDB1-213ENST00000539332 MYL6P60660 151 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 TFAMQ00059 246 aaKnown RBP9.42□□□□□ -0.9
DDB1-213ENST00000539332 XKR4Q5GH76 650 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 CCDC70Q6NSX1 233 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 ALKAL1Q6UXT8 129 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 SLFN11Q7Z7L1 901 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 RFFLQ8WZ73 363 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 ELMO3Q96BJ8 720 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 FAM212AQ96EL1 285 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 CALR3Q96L12 384 aaKnown RBP9.42□□□□□ -0.9
DDB1-213ENST00000539332 SNX27Q96L92 541 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 ACAP3Q96P50 834 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 TSPAN18Q96SJ8 248 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 HIPK3Q9H422 1215 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 FAM124BQ9H5Z6 455 aaPredicted RBP9.42□□□□□ -0.9
DDB1-213ENST00000539332 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■■■■ 159.5
DDB1-213ENST00000539332 TBX21Q9UL17 535 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 HES2Q9Y543 173 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 TTC3P53804 2025 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 NBNO60934 754 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 RNF40O75150 1001 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 MTA2O94776 668 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 MMEP08473 750 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 ATICP31939 592 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 ASPAP45381 313 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 VSNL1P62760 191 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 DSC3Q14574 896 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 GPNMBQ14956 572 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 TMEM132DQ14C87 1099 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 ZBTB6Q15916 424 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 IFI16Q16666 785 aaKnown RBP9.42□□□□□ -0.9
DDB1-213ENST00000539332 UBE2Q1Q7Z7E8 422 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 SMG8Q8ND04 991 aaKnown RBP9.42□□□□□ -0.9
DDB1-213ENST00000539332 TLR10Q9BXR5 811 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 WNT8AQ9H1J5 351 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 FAM105AQ9NUU6 356 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 SNTG2Q9NY99 539 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 CNTN3Q9P232 1028 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 ITGA11Q9UKX5 1188 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 SNX12Q9UMY4 172 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 IPPQ9Y573 584 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 MICAL3Q7RTP6 2002 aa9.42□□□□□ -0.9
DDB1-213ENST00000539332 EBAG9O00559 213 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 ENC1O14682 589 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 BUB1O43683 1085 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 MGEA5O60502 916 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 RECQL4O94761 1208 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 CYP1A1P04798 512 aaPredicted RBP9.41□□□□□ -0.9
DDB1-213ENST00000539332 CLTBP09497 229 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 UNGP13051 313 aaPredicted RBP9.41□□□□□ -0.9
DDB1-213ENST00000539332 KRT5P13647 590 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 TRPC3Q13507 836 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 CLEC16AQ2KHT3 1053 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 ZNF699Q32M78 642 aa9.41□□□□□ -0.9
DDB1-213ENST00000539332 MEI1Q5TIA1 1274 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms