RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 WHAMMQ8TF30 809 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 CASKIN2Q8WXE0 1202 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 UPF3AQ9H1J1 476 aaKnown RBP21.66■■□□□ 1.06
DDX55-205ENST00000538744 SPC25Q9HBM1 224 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.66■■□□□ 1.06
DDX55-205ENST00000538744 SCN10AQ9Y5Y9 1956 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 ESYT3A0FGR9 886 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 CARSP49589 748 aaKnown RBP21.66■■□□□ 1.06
DDX55-205ENST00000538744 FLT3LGP49771 235 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 PTPN11Q06124 597 aaPredicted RBP21.66■■□□□ 1.06
DDX55-205ENST00000538744 NNTQ13423 1086 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 DENND1BQ6P3S1 775 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 SND1Q7KZF4 910 aaKnown RBP eCLIP21.66■■□□□ 1.06
DDX55-205ENST00000538744 ADAT2Q7Z6V5 191 aaKnown RBP21.66■■□□□ 1.06
DDX55-205ENST00000538744 ERICH1Q86X53 443 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 EIF1ADQ8N9N8 165 aaKnown RBP21.66■■□□□ 1.06
DDX55-205ENST00000538744 BEST2Q8NFU1 509 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 IFT81Q8WYA0 676 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 CAVIN3Q969G5 261 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 TMEM176AQ96HP8 235 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 ELOVL4Q9GZR5 314 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 NXF3Q9H4D5 531 aaKnown RBP21.66■■□□□ 1.06
DDX55-205ENST00000538744 GPBP1L1Q9HC44 474 aaPredicted RBP21.66■■□□□ 1.06
DDX55-205ENST00000538744 AMACRQ9UHK6 382 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 LCMT1Q9UIC8 334 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 NR2E1Q9Y466 385 aa21.66■■□□□ 1.06
DDX55-205ENST00000538744 BHMG1C9JSJ3 638 aaPredicted RBP21.65■■□□□ 1.06
DDX55-205ENST00000538744 TLR3O15455 904 aaKnown RBP21.65■■□□□ 1.06
DDX55-205ENST00000538744 RECQL4O94761 1208 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 MAN1A1P33908 653 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 INCA1Q0VD86 236 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 CUL1Q13616 776 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 CYP4F22Q6NT55 531 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 DNAJC24Q6P3W2 148 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 WDTC1Q8N5D0 677 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.65■■□□□ 1.06
DDX55-205ENST00000538744 GDAP1L1Q96MZ0 367 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 TWNKQ96RR1 684 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.65■■□□□ 1.06
DDX55-205ENST00000538744 CNTN3Q9P232 1028 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 IP6K2Q9UHH9 426 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 STRIP2Q9ULQ0 834 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 HPCAL4Q9UM19 191 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 BARX2Q9UMQ3 279 aaPredicted RBP21.65■■□□□ 1.06
DDX55-205ENST00000538744 NFU1Q9UMS0 254 aa21.65■■□□□ 1.06
DDX55-205ENST00000538744 TAP1Q03518 808 aa21.64■■□□□ 1.06
DDX55-205ENST00000538744 ZBTB6Q15916 424 aa21.64■■□□□ 1.06
DDX55-205ENST00000538744 SLC13A5Q86YT5 568 aaPredicted RBP21.64■■□□□ 1.06
DDX55-205ENST00000538744 ZMAT2Q96NC0 199 aaKnown RBP21.64■■□□□ 1.06
DDX55-205ENST00000538744 ERVK-5Q9HDB9 667 aa21.64■■□□□ 1.06
DDX55-205ENST00000538744 HMGXB4Q9UGU5 601 aa21.64■■□□□ 1.06
DDX55-205ENST00000538744 MTUS1Q9ULD2 1270 aa21.64■■□□□ 1.06
DDX55-205ENST00000538744 HES2Q9Y543 173 aa21.64■■□□□ 1.06
DDX55-205ENST00000538744 SEPT4O43236 478 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 PSTPIP1O43586 416 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 PHF2O75151 1096 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 ALKAL1Q6UXT8 129 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 CELF4Q9BZC1 486 aaKnown RBP21.63■■□□□ 1.05
DDX55-205ENST00000538744 CXCL16Q9H2A7 254 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 TCRBV5S1A1TA0A578 114 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 TMEM191CA6NGB0 347 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 TTI1O43156 1089 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 RARBP10826 455 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 VDRP11473 427 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 OAS2P29728 719 aaKnown RBP21.63■■□□□ 1.05
DDX55-205ENST00000538744 CHRNA3P32297 505 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 PRKCZQ05513 592 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 ORC1Q13415 861 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 DHX34Q14147 1143 aaKnown RBP21.63■■□□□ 1.05
DDX55-205ENST00000538744 RHOT1Q8IXI2 618 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 LRRC52Q8N7C0 313 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 C3orf20Q8ND61 904 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 TSPAN18Q96SJ8 248 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 APOL6Q9BWW8 343 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 TUBGCP4Q9UGJ1 667 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 GTF2IRD1Q9UHL9 959 aa21.63■■□□□ 1.05
DDX55-205ENST00000538744 UBQLN1Q9UMX0 589 aaKnown RBP21.63■■□□□ 1.05
DDX55-205ENST00000538744 SCN1AP35498 2009 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 M0QZ92 97 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 KIF3CO14782 793 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 GJB6O95452 261 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 PGK1P00558 417 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 NKX3-2P78367 333 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 MRPS6P82932 125 aaKnown RBP21.62■■□□□ 1.05
DDX55-205ENST00000538744 DR1Q01658 176 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 NOGQ13253 232 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 NBPF20Q3BBV1 942 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 SGO2Q562F6 1265 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 UBXN11Q5T124 520 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 CXCL17Q6UXB2 119 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 PRELID2Q8N945 189 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 RAB17Q9H0T7 212 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 KIAA1257Q9ULG3 409 aa21.62■■□□□ 1.05
DDX55-205ENST00000538744 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.62■■□□□ 1.05
DDX55-205ENST00000538744 UTP11Q9Y3A2 253 aaKnown RBP21.62■■□□□ 1.05
DDX55-205ENST00000538744 FAM187AA6NFU0 413 aa21.61■■□□□ 1.05
DDX55-205ENST00000538744 NDST1P52848 882 aa21.61■■□□□ 1.05
DDX55-205ENST00000538744 RPL7AP62424 266 aaKnown RBP21.61■■□□□ 1.05
DDX55-205ENST00000538744 CNGA2Q16280 664 aa21.61■■□□□ 1.05
DDX55-205ENST00000538744 DCUN1D2Q6PH85 259 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms