RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 NUDCD1Q96RS6 583 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 DCLRE1BQ9H816 532 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 C17orf75Q9HAS0 396 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 SPATS2LQ9NUQ6 558 aaKnown RBP12.83□□□□□ -0.36
CPSF7-218ENST00000537641 MAP3K20Q9NYL2 800 aaKnown RBP12.83□□□□□ -0.36
CPSF7-218ENST00000537641 ZFP69BQ9UJL9 534 aa12.83□□□□□ -0.36
CPSF7-218ENST00000537641 POC1B-GALNT4F8VUJ3 575 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 LINGO3P0C6S8 592 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 CA4P22748 312 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 MARK3P27448 753 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 ABCD1P33897 745 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 ZNF280AP59817 542 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 NOMO3P69849 1222 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 C1QBPQ07021 282 aaKnown RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 TKFCQ3LXA3 575 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 FAM102BQ5T8I3 360 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 PAXIP1Q6ZW49 1069 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 OTOAQ7RTW8 1153 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 CPA5Q8WXQ8 436 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 TEPSINQ96N21 525 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 SLCO1B3Q9NPD5 702 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 IP6K2Q9UHH9 426 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 DENND3A2RUS2 1198 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 NFIBO00712 420 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 AHCYL1O43865 530 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 TJP3O95049 919 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 NPTXRO95502 500 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 PECAM1P16284 738 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 RPS12P25398 132 aaKnown RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 EPHB2P29323 1055 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 SFNP31947 248 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 PHBP35232 272 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 RPA3P35244 121 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 NPTX2P47972 431 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 NFX1Q12986 1120 aaKnown RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 SLC1A5Q15758 541 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 WDR44Q5JSH3 913 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 LRRC38Q5VT99 294 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 ANO7Q6IWH7 933 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 SLC39A4Q6P5W5 647 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 PCGF5Q86SE9 256 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 RDM1Q8NG50 284 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 FEZF2Q8TBJ5 459 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 ZNF483Q8TF39 744 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 POMGNT1Q8WZA1 660 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 SPOCK2Q92563 424 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 ZNF75CPQ92670 426 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 ALKBH8Q96BT7 664 aaKnown RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 C11orf70Q9BRQ4 267 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 VPS37BQ9H9H4 285 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 SLC38A10Q9HBR0 1119 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 PCDH9Q9HC56 1237 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 GPRC5CQ9NQ84 441 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 KMT5AQ9NQR1 393 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 PKD2L1Q9P0L9 805 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 COL20A1Q9P218 1284 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 STOML1Q9UBI4 398 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 GRID1Q9ULK0 1009 aa12.82□□□□□ -0.36
CPSF7-218ENST00000537641 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.82□□□□□ -0.36
CPSF7-218ENST00000537641 LRRD1A4D1F6 860 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 TM9SF1O15321 606 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 TSHRP16473 764 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 GM2AP17900 193 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 CD58P19256 250 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 PCK1P35558 622 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 ARSEP51690 589 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 CLDN10P78369 228 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 SPP2Q13103 211 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 MAMLD1Q13495 774 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 ZRSR2Q15696 482 aaKnown RBP12.81□□□□□ -0.36
CPSF7-218ENST00000537641 TAF1BQ53T94 588 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-218ENST00000537641 DALRD3Q5D0E6 543 aaKnown RBP12.81□□□□□ -0.36
CPSF7-218ENST00000537641 XKR9Q5GH70 373 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 RNASEH2BQ5TBB1 312 aaKnown RBP12.81□□□□□ -0.36
CPSF7-218ENST00000537641 ZNF449Q6P9G9 518 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 LVRNQ6Q4G3 990 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 APBB1IPQ7Z5R6 666 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-218ENST00000537641 ABRAQ8N0Z2 381 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 C4orf33Q8N1A6 199 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 RBBP8NLQ8NC74 664 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-218ENST00000537641 DNAJC9Q8WXX5 260 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 NKD2Q969F2 451 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-218ENST00000537641 SLITRK1Q96PX8 696 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 NTPCRQ9BSD7 190 aaKnown RBP12.81□□□□□ -0.36
CPSF7-218ENST00000537641 FAM167BQ9BTA0 163 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 KIF9Q9HAQ2 790 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 ANKFY1Q9P2R3 1169 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 ZNF148Q9UQR1 794 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 WDR81Q562E7 1941 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 SIP14410 1827 aa12.81□□□□□ -0.36
CPSF7-218ENST00000537641 WDR64B1ANS9 1081 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 H0YCG3 227 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 TLR3O15455 904 aaKnown RBP12.8□□□□□ -0.36
CPSF7-218ENST00000537641 KRT1P04264 644 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 ITGAVP06756 1048 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 FESP07332 822 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 ATP4AP20648 1035 aa12.8□□□□□ -0.36
CPSF7-218ENST00000537641 VCPP55072 806 aaKnown RBP12.8□□□□□ -0.36
CPSF7-218ENST00000537641 GEMIN4P57678 1058 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms