RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ANKRD63C9JTQ0 380 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 MAPK13O15264 365 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 RIPK2O43353 540 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 FDX1P10109 184 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 ABCB4P21439 1286 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 SFNP31947 248 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 PPP3CAQ08209 521 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 KPNB1Q14974 876 aaKnown RBP14.75□□□□□ -0.05
LIG1-203ENST00000536218 GADL1Q6ZQY3 521 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 MOB2Q70IA6 237 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 SPATA24Q86W54 205 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 SPIRE2Q8WWL2 714 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 STRA6Q9BX79 667 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 ERVK-5Q9HDB9 667 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 DNAJC17Q9NVM6 304 aaKnown RBP14.75□□□□□ -0.05
LIG1-203ENST00000536218 ZNF711Q9Y462 761 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 AFG3L2Q9Y4W6 797 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 MYH11P35749 1972 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 DENND3A2RUS2 1198 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 NPTX2P47972 431 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 VAMP7P51809 220 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 CDR2Q01850 454 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 OCRLQ01968 901 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 DNAJC3Q13217 504 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 MTFR1Q15390 333 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 MTERF2Q49AM1 385 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 PHLDB3Q6NSJ2 640 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 ZDHHC24Q6UX98 284 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 CYFIP1Q7L576 1253 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 CROCCP2Q86T23 111 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 CCDC125Q86Z20 511 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 GPC2Q8N158 579 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 LRRC57Q8N9N7 239 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 XXYLT1Q8NBI6 393 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 HAUS1Q96CS2 278 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 POP1Q99575 1024 aaKnown RBP14.75□□□□□ -0.05
LIG1-203ENST00000536218 UBE2TQ9NPD8 197 aaPredicted RBP14.75□□□□□ -0.05
LIG1-203ENST00000536218 TBX10O75333 385 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 ITGA2BP08514 1039 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 LMNB1P20700 586 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 CD151P48509 253 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 SLC34A1Q06495 639 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 VPS36Q86VN1 386 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 CBWD2Q8IUF1 395 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 CCDC60Q8IWA6 550 aaPredicted RBP14.75□□□□□ -0.05
LIG1-203ENST00000536218 BSNDQ8WZ55 320 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 LENG1Q96BZ8 264 aaPredicted RBP14.75□□□□□ -0.05
LIG1-203ENST00000536218 JPH1Q9HDC5 661 aaPredicted RBP14.75□□□□□ -0.05
LIG1-203ENST00000536218 KMT5AQ9NQR1 393 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 SLC4A7Q9Y6M7 1214 aa14.75□□□□□ -0.05
LIG1-203ENST00000536218 UBE4BO95155 1302 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 PASKQ96RG2 1323 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 DDX3XO00571 662 aaKnown RBP eCLIP14.74□□□□□ -0.052e-12■■■□□ 16.8
LIG1-203ENST00000536218 KCNA2P16389 499 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 DMP1Q13316 513 aaPredicted RBP14.74□□□□□ -0.05
LIG1-203ENST00000536218 SPDYCQ5MJ68 293 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 C4orf50Q6ZRC1 276 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 SRRM1Q8IYB3 904 aaKnown RBP14.74□□□□□ -0.05
LIG1-203ENST00000536218 SPOCK2Q92563 424 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 INPP5DQ92835 1189 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 ZNF184Q99676 751 aaPredicted RBP14.74□□□□□ -0.05
LIG1-203ENST00000536218 CLIC5Q9NZA1 410 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 SLC9A2Q9UBY0 812 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 RASAL2Q9UJF2 1139 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 PTPN22Q9Y2R2 807 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 CCDC160A6NGH7 325 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 FOXN3O00409 490 aaPredicted RBP14.74□□□□□ -0.05
LIG1-203ENST00000536218 SOX5P35711 763 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 JAM2P57087 298 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 ACTR2P61160 394 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 SP2Q02086 613 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 TTLL12Q14166 644 aaPredicted RBP14.74□□□□□ -0.05
LIG1-203ENST00000536218 MAP7D3Q8IWC1 876 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 KBTBD2Q8IY47 623 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.74□□□□□ -0.05
LIG1-203ENST00000536218 PLEKHO2Q8TD55 490 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 WDR60Q8WVS4 1066 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 GPRASP2Q96D09 838 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 C18orf8Q96DM3 657 aa14.74□□□□□ -0.05
LIG1-203ENST00000536218 GTPBP10A4D1E9 387 aaKnown RBP14.73□□□□□ -0.05
LIG1-203ENST00000536218 KIAA0391O15091 583 aaKnown RBP14.73□□□□□ -0.05
LIG1-203ENST00000536218 LYPLA2O95372 231 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 ASLP04424 464 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 T-ENOLP0DO92 83 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 RPL21P46778 160 aaKnown RBP14.73□□□□□ -0.05
LIG1-203ENST00000536218 TAF1BQ53T94 588 aaPredicted RBP14.73□□□□□ -0.05
LIG1-203ENST00000536218 ZNF746Q6NUN9 644 aaPredicted RBP14.73□□□□□ -0.05
LIG1-203ENST00000536218 KAT5Q92993 513 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 OTUD5Q96G74 571 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 STK33Q9BYT3 514 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 ELP3Q9H9T3 547 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 APEX2Q9UBZ4 518 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 AMFRQ9UKV5 643 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 WASF2Q9Y6W5 498 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 POLR2AP24928 1970 aaKnown RBP14.73□□□□□ -0.05
LIG1-203ENST00000536218 H2AFZP0C0S5 128 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 FOXN2P32314 431 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 PTENP60484 403 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 POU5F1Q01860 360 aaKnown RBP14.73□□□□□ -0.05
LIG1-203ENST00000536218 CCDC15Q0P6D6 951 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms