RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 COL6A3P12111 3177 aa10.77□□□□□ -0.68
LDLRAD3-206ENST00000534091 CDH23Q9H251 3354 aa10.77□□□□□ -0.68
LDLRAD3-206ENST00000534091 INPPL1O15357 1258 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 KRT86O43790 486 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 RECQL4O94761 1208 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 KCNE1P15382 129 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 ATF7P17544 494 aaPredicted RBP10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 ZBTB6Q15916 424 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 GLB1LQ6UWU2 654 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 SPRED2Q7Z698 418 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 KIAA1328Q86T90 577 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 C1orf127Q8N9H9 656 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 SLC30A5Q8TAD4 765 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 FAM84AQ96KN4 292 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 ASB2Q96Q27 587 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 PI4K2AQ9BTU6 479 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 NIF3L1Q9GZT8 377 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 XYLT2Q9H1B5 865 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 CWH43Q9H720 699 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 RNF19AQ9NV58 838 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 SNTG2Q9NY99 539 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 SIX4Q9UIU6 781 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 INTUQ9ULD6 942 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 IPPQ9Y573 584 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 NUB1Q9Y5A7 615 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 PCDHA13Q9Y5I0 950 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 CHD7Q9P2D1 2997 aa10.77□□□□□ -0.69
LDLRAD3-206ENST00000534091 A0A087X0T9 212 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 BTNL10A8MVZ5 291 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 DDX3XO00571 662 aaKnown RBP eCLIP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 XPOTO43592 962 aaKnown RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 CST3P01034 146 aaPredicted RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 FAM228BP0C875 321 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 PNMA6AP0CW24 399 aaPredicted RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 FGFR1P11362 822 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 CYP3A5P20815 502 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 ACO1P21399 889 aaKnown RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 MAGEA1P43355 309 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 BPIFB4P59827 614 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 MYL6P60660 151 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 YWHAEP62258 255 aaKnown RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 ARID5AQ03989 594 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 KRT17Q04695 432 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 GFPT1Q06210 699 aaPredicted RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 NAB2Q15742 525 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 ZNF699Q32M78 642 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 SPOUT1Q5T280 376 aaKnown RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 ZNF677Q86XU0 584 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 KLHL23Q8NBE8 558 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 COLGALT1Q8NBJ5 622 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 SMG8Q8ND04 991 aaKnown RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 LNX1Q8TBB1 728 aaPredicted RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 SPPL3Q8TCT6 385 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 URGCPQ8TCY9 931 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 EPS8L1Q8TE68 723 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 ZNF558Q96NG5 402 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 CDCA3Q99618 268 aaPredicted RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 NXF3Q9H4D5 531 aaKnown RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 ADAMTS1Q9UHI8 967 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 NAGPAQ9UK23 515 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 NOCTQ9UK39 431 aaKnown RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 UBQLN1Q9UMX0 589 aaKnown RBP10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 GIT1Q9Y2X7 761 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 PCDHB2Q9Y5E7 798 aa10.76□□□□□ -0.69
LDLRAD3-206ENST00000534091 GRM6O15303 877 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 KIF5CO60282 957 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 ITGB1P05556 798 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 GZMAP12544 262 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 CYP11B1P15538 503 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 ASPAP45381 313 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 ALDH7A1P49419 539 aaKnown RBP10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 PDE6CP51160 858 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 ZNF132P52740 706 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 RBP5P82980 135 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 CYP27A1Q02318 531 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 KIF5AQ12840 1032 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 SKIV2LQ15477 1246 aaKnown RBP10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 CCDC85BQ15834 202 aaPredicted RBP10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 PAN2Q504Q3 1202 aaKnown RBP10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 ZNF667Q5HYK9 610 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 NOMO2Q5JPE7 1267 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 CLLU1OSQ5K130 101 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 DNTTIP2Q5QJE6 756 aaKnown RBP10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 CCDC122Q5T0U0 273 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 SPOPLQ6IQ16 392 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 ALKBH5Q6P6C2 394 aaKnown RBP10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 KCNT2Q6UVM3 1135 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 MICALL1Q8N3F8 863 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 TTC39CQ8N584 583 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 LRRC52Q8N7C0 313 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 BEST2Q8NFU1 509 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 KIF18AQ8NI77 898 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 PPM1EQ8WY54 764 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 PABPC5Q96DU9 382 aaKnown RBP10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 KIF12Q96FN5 646 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 AGPAT1Q99943 283 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 TMEM175Q9BSA9 504 aa10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.75□□□□□ -0.69
LDLRAD3-206ENST00000534091 BCO2Q9BYV7 579 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms