RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 KLRC2P26717 231 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 TRPC3Q13507 836 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 MOGSQ13724 837 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 CYP4A22Q5TCH4 519 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 ATF7IP2Q5U623 682 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 MPZL3Q6UWV2 235 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 EXOC3L1Q86VI1 746 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 ERO1BQ86YB8 467 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 C3orf20Q8ND61 904 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 ZNF317Q96PQ6 595 aaPredicted RBP16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 SLITRK1Q96PX8 696 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 INO80BQ9C086 356 aaPredicted RBP16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 TJP2Q9UDY2 1190 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 POLIQ9UNA4 740 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 AGTPBP1Q9UPW5 1226 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 LSM8O95777 96 aaKnown RBP16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 SLC25A27O95847 323 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 CALB1P05937 261 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 CREB1P16220 341 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 RAP1GAPP47736 663 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 IREB2P48200 963 aaKnown RBP16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 ZNF699Q32M78 642 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 MFSD5Q6N075 450 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 EFCAB12Q6NXP0 572 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 YTHDF3Q7Z739 585 aaKnown RBP16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 OTUD6BQ8N6M0 293 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 TMEM35BQ8NCS4 154 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 SEC16BQ96JE7 1060 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 JPH2Q9BR39 696 aaPredicted RBP16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 FHDC1Q9C0D6 1143 aaPredicted RBP16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 RNPEPQ9H4A4 650 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 HOMER3Q9NSC5 361 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 CTNNAL1Q9UBT7 734 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 NXF1Q9UBU9 619 aaKnown RBP16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 CYTH4Q9UIA0 394 aa16.24■□□□□ 0.19
CACNA1E-208ENST00000533229 GAS2O43903 313 aaKnown RBP16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 CXCL8P10145 99 aa16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 PPP1R2P3Q6NXS1 205 aa16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 DNAJC24Q6P3W2 148 aa16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 ZNF365Q70YC5 407 aa16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 KAT2BQ92831 832 aa16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 CHMP6Q96FZ7 201 aa16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 ROPN1BQ9BZX4 212 aaPredicted RBP16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 C2orf40Q9H1Z8 148 aa16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 ROPN1Q9HAT0 212 aaPredicted RBP16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 GGA2Q9UJY4 613 aa16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 DNPEPQ9ULA0 475 aa16.23■□□□□ 0.19
CACNA1E-208ENST00000533229 SPDYE5A6NIY4 337 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 CXCL11O14625 94 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 LIASO43766 372 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 B4GALT4O60513 344 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 KIAA0754O94854 1291 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 CPP00450 1065 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 ZSCAN5DPP0CG00 497 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 TXNP10599 105 aaKnown RBP16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 ATF7P17544 494 aaPredicted RBP16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 EIF4BP23588 611 aaKnown RBP16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 CDH5P33151 784 aaPredicted RBP16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 CDH8P55286 799 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 MBTD1Q05BQ5 628 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 KCTD2Q14681 263 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 ZFYVE27Q5T4F4 411 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 WDR78Q5VTH9 848 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 DENND1BQ6P3S1 775 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 DCUN1D2Q6PH85 259 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 KCNV1Q6PIU1 500 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 MICALCLQ6ZW33 695 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 CROCCP2Q86T23 111 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 RCOR2Q8IZ40 523 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 IPO4Q8TEX9 1081 aaKnown RBP16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 MMP19Q99542 508 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 PRMT1Q99873 361 aaKnown RBP16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 CDT1Q9H211 546 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 NINJ2Q9NZG7 142 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 SIX4Q9UIU6 781 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 PCDHGC3Q9UN70 934 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 GPR25O00155 361 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 KRT1P04264 644 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 ORC1Q13415 861 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 SPRED3Q2MJR0 410 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 GJC2Q5T442 439 aaPredicted RBP16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 IZUMO3Q5VZ72 239 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 CPLX4Q7Z7G2 160 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 ERICH1Q86X53 443 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 ANKRD13AQ8IZ07 590 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 CCDC89Q8N998 374 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 IFT122Q9HBG6 1241 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 KCNH4Q9UQ05 1017 aa16.22■□□□□ 0.19
CACNA1E-208ENST00000533229 PAPPA2Q9BXP8 1791 aa16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 LRRC37A2A6NM11 1700 aa16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 KRT19P08727 400 aa16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 CETPP11597 493 aa16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 ETS1P14921 441 aa16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 RFC1P35251 1148 aaPredicted RBP16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 IGBP1P78318 339 aa16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 CAV1Q03135 178 aa16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 SURF1Q15526 300 aa16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 P3H1Q32P28 736 aa16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 PTPN20Q4JDL3 420 aa16.21■□□□□ 0.19
CACNA1E-208ENST00000533229 RNF187Q5TA31 235 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms