RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 PAGE5Q96GU1 130 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 SLITRK6Q9H5Y7 841 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 ASAH2Q9NR71 780 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 INSL5Q9Y5Q6 135 aa12.32□□□□□ -0.44
TRAPPC4-213ENST00000533149 ZZEF1O43149 2961 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 IGF2RP11717 2491 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 BCLAF3A2AJT9 711 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 KHNYNO15037 678 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 MED24O75448 989 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 MYL4P12829 197 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 PLCG1P19174 1290 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 TKTP29401 623 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 HOXC13P31276 330 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 EPHA5P54756 1037 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 EPHA7Q15375 998 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 NAB2Q15742 525 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 ECM1Q16610 540 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 ARHGAP29Q52LW3 1261 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 TPGS2Q68CL5 300 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 PDZD3Q86UT5 571 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 GRAMD1CQ8IYS0 662 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 ERCC4Q92889 916 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 CDK5RAP3Q96JB5 506 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 PRIMPOLQ96LW4 560 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 UROC1Q96N76 676 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 DUSP15Q9H1R2 295 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 SLC32A1Q9H598 525 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 HOOK1Q9UJC3 728 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 MAFFQ9ULX9 164 aa12.31□□□□□ -0.44
TRAPPC4-213ENST00000533149 SPAG17Q6Q759 2223 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 SDK1Q7Z5N4 2213 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 VWA8A3KMH1 1905 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 HYAL3O43820 417 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 MOSPD3O75425 235 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 SPATA31C1P0DKV0 1188 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 RPA1P27694 616 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 RDXP35241 583 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 AFMP43652 599 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 ARPP19P56211 112 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 PNOCQ13519 176 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 CAPSQ13938 189 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 POSTNQ15063 836 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 TEAD2Q15562 447 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 TMEM119Q4V9L6 283 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 HYIQ5T013 277 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 PROSER1Q86XN7 944 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 HS6ST3Q8IZP7 471 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 LRRC15Q8TF66 581 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 CCDC34Q96HJ3 373 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 HSD17B14Q9BPX1 270 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 LXNQ9BS40 222 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 POLR3CQ9BUI4 534 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 CUEDC2Q9H467 287 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 ZSWIM4Q9H7M6 989 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 XPNPEP1Q9NQW7 623 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 SNTG2Q9NY99 539 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 GTSE1Q9NYZ3 720 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 KIAA1468Q9P260 1216 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 GPSM3Q9Y4H4 160 aa12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 PDCD11Q14690 1871 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-213ENST00000533149 A0A087WWV3 80 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 EIF4E1BA6NMX2 242 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 H7C4K7 107 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 DPYSL4O14531 572 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 RECQL4O94761 1208 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 SLITRK3O94933 977 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 SEC24AO95486 1093 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 GJA1P17302 382 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 ARL2P36404 184 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 PLCB2Q00722 1185 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 HAUS3Q68CZ6 603 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 KIAA1211LQ6NV74 962 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 SASS6Q6UVJ0 657 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 KCNK18Q7Z418 384 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 C11orf74Q86VG3 221 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 GAS2L3Q86XJ1 694 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 CATSPER3Q86XQ3 398 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 TTC8Q8TAM2 541 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 ASAP3Q8TDY4 903 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 RSPRY1Q96DX4 576 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 DYDC2Q96IM9 177 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 TMEM209Q96SK2 561 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 TUFT1Q9NNX1 390 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 BLOC1S4Q9NUP1 217 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 PRMT7Q9NVM4 692 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 RGL1Q9NZL6 768 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 CEP72Q9P209 647 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 STK17AQ9UEE5 414 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 KIAA1024Q9UPX6 916 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 PCDHA5Q9Y5H7 936 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 NCANO14594 1321 aa12.29□□□□□ -0.44
TRAPPC4-213ENST00000533149 H0Y626 953 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 CDX4O14627 284 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 N4BP3O15049 544 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 DGAT1O75907 488 aa12.28□□□□□ -0.44
TRAPPC4-213ENST00000533149 TRIM16O95361 564 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms