RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 UBR7Q8N806 425 aa15.3■□□□□ 0.04
COL16A1-217ENST00000532877 SHC3Q92529 594 aa15.3■□□□□ 0.04
COL16A1-217ENST00000532877 JAKMIP2Q96AA8 810 aa15.3■□□□□ 0.04
COL16A1-217ENST00000532877 SUSD3Q96L08 255 aa15.3■□□□□ 0.04
COL16A1-217ENST00000532877 SPAG5Q96R06 1193 aa15.3■□□□□ 0.04
COL16A1-217ENST00000532877 PRDM12Q9H4Q4 367 aa15.3■□□□□ 0.04
COL16A1-217ENST00000532877 CYP3A43Q9HB55 503 aa15.3■□□□□ 0.04
COL16A1-217ENST00000532877 IMPACTQ9P2X3 320 aa15.3■□□□□ 0.04
COL16A1-217ENST00000532877 LUC7L2Q9Y383 392 aaKnown RBP15.3■□□□□ 0.04
COL16A1-217ENST00000532877 LINC01553A4QN01 128 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 LRRC53A6NM62 1247 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 HUS1O60921 280 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 PNMA6AP0CW24 399 aaPredicted RBP15.29■□□□□ 0.04
COL16A1-217ENST00000532877 ODC1P11926 461 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 CD58P19256 250 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 ACO1P21399 889 aaKnown RBP15.29■□□□□ 0.04
COL16A1-217ENST00000532877 CDH8P55286 799 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 ZBED6P86452 979 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 GOLGA8FQ08AF8 430 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 GOLGA8DPQ0D2H9 430 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 FUT10Q6P4F1 479 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 PDXDC1Q6P996 788 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 ADGRF2Q8IZF7 708 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 PDCL2Q8N4E4 241 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 APPL2Q8NEU8 664 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 KBTBD7Q8WVZ9 684 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 IGSF21Q96ID5 467 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 MRPL45Q9BRJ2 306 aaKnown RBP15.29■□□□□ 0.04
COL16A1-217ENST00000532877 AAASQ9NRG9 546 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 CISHQ9NSE2 258 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 MYO6Q9UM54 1294 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 PCDHB8Q9UN66 801 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 PCDHA11Q9Y5I1 949 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 BRWD1Q9NSI6 2320 aa15.29■□□□□ 0.04
COL16A1-217ENST00000532877 GOLGA6L6A8MZA4 724 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 AKR1B15C9JRZ8 316 aaPredicted RBP15.28■□□□□ 0.04
COL16A1-217ENST00000532877 TRAPPC3O43617 180 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 TACC1O75410 805 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 ARHGEF15O94989 841 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 CA3P07451 260 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 KRT9P35527 623 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 PPM1AP35813 382 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 ADKP55263 362 aaKnown RBP15.28■□□□□ 0.04
COL16A1-217ENST00000532877 YWHAEP62258 255 aaKnown RBP15.28■□□□□ 0.04
COL16A1-217ENST00000532877 INCA1Q0VD86 236 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 WSCD1Q658N2 575 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 E4F1Q66K89 784 aaPredicted RBP15.28■□□□□ 0.04
COL16A1-217ENST00000532877 DPH6Q7L8W6 267 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 CNGA4Q8IV77 575 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 TMEM86AQ8N2M4 240 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 ZNF397Q8NF99 534 aaPredicted RBP15.28■□□□□ 0.04
COL16A1-217ENST00000532877 GAS2L1Q99501 681 aaPredicted RBP15.28■□□□□ 0.04
COL16A1-217ENST00000532877 VN1R3Q9BXE9 311 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 GPR62Q9BZJ7 368 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 FAM124BQ9H5Z6 455 aaPredicted RBP15.28■□□□□ 0.04
COL16A1-217ENST00000532877 SPG21Q9NZD8 308 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 HMGXB4Q9UGU5 601 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 YBX2Q9Y2T7 364 aaKnown RBP15.28■□□□□ 0.04
COL16A1-217ENST00000532877 PCDHB4Q9Y5E5 795 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 PCDHB12Q9Y5F1 795 aa15.28■□□□□ 0.04
COL16A1-217ENST00000532877 TIMM13Q9Y5L4 95 aaPredicted RBP15.28■□□□□ 0.04
COL16A1-217ENST00000532877 ARHGEF37A1IGU5 675 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 FOXN3O00409 490 aaPredicted RBP15.27■□□□□ 0.04
COL16A1-217ENST00000532877 CILPO75339 1184 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 EFEMP2O95967 443 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 CYP11A1P05108 521 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 KRT5P13647 590 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 TYMPP19971 482 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 WARSP23381 471 aaKnown RBP15.27■□□□□ 0.04
COL16A1-217ENST00000532877 TKTP29401 623 aaKnown RBP15.27■□□□□ 0.04
COL16A1-217ENST00000532877 CTNNB1P35222 781 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 SOX5P35711 763 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 STAT1P42224 750 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 CCDC173Q0VFZ6 552 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 ELAVL2Q12926 359 aaKnown RBP15.27■□□□□ 0.04
COL16A1-217ENST00000532877 ARID5BQ14865 1188 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 TMEM270Q6UE05 265 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 OSTM1Q86WC4 334 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 GPIHBP1Q8IV16 184 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 FAM71AQ8IYT1 594 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 RNF168Q8IYW5 571 aaPredicted RBP15.27■□□□□ 0.04
COL16A1-217ENST00000532877 TTC39CQ8N584 583 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 TC2NQ8N9U0 490 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 TMEM169Q96HH4 297 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 NECAB3Q96P71 396 aaPredicted RBP15.27■□□□□ 0.04
COL16A1-217ENST00000532877 DNAJC7Q99615 494 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 ABHD10Q9NUJ1 306 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 DSEQ9UL01 958 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 BARX2Q9UMQ3 279 aaPredicted RBP15.27■□□□□ 0.04
COL16A1-217ENST00000532877 CNTN6Q9UQ52 1028 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 RWDD3Q9Y3V2 267 aa15.27■□□□□ 0.04
COL16A1-217ENST00000532877 PLXNA4Q9HCM2 1894 aa15.27■□□□□ 0.03
COL16A1-217ENST00000532877 GABRDO14764 452 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 SYN3O14994 580 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 GFPT2O94808 682 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 FAM163BP0C2L3 166 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 USP8P40818 1118 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 ZNF132P52740 706 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 NDST1P52848 882 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 GSDMDP57764 484 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms