RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 AVPR1AP37288 418 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 SLCO1A2P46721 670 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 CASP5P51878 434 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 ZNF200P98182 395 aaPredicted RBP16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 EFEMP1Q12805 493 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 ABHD15Q6UXT9 468 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 PYROXD1Q8WU10 500 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 WNT8AQ9H1J5 351 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 TBK1Q9UHD2 729 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 ANGPTL3Q9Y5C1 460 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 C4BP0C0L5 1744 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 MMEP08473 750 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 FSTL1Q12841 308 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 IL17AQ16552 155 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 HSD17B14Q9BPX1 270 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 TLL1O43897 1013 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 GYPCP04921 128 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 GPD1P21695 349 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 CCDC6Q16204 474 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 RNF10Q8N5U6 811 aaKnown RBP16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 ATP6V1E2Q96A05 226 aa16.55■□□□□ 0.24
PPFIA1-222ENST00000532504 WEE1P30291 646 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 MSH2P43246 934 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 CRYBB1P53674 252 aaPredicted RBP16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 HP1BP3Q5SSJ5 553 aaPredicted RBP16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 BRSK2Q8IWQ3 736 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 ACSF2Q96CM8 615 aaPredicted RBP16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 TMEM176AQ96HP8 235 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 PHF20L1A8MW92 1017 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 NT5C1B-RDH14C9J2C7 533 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 NDST1P52848 882 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 PCGF5Q86SE9 256 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 AGAP3Q96P47 875 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 SPATA31C1P0DKV0 1188 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 BRD3Q15059 726 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 SAPCD2Q86UD0 394 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 DDX47Q9H0S4 455 aaKnown RBP16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 UVRAGQ9P2Y5 699 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 KPNA7A9QM74 516 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 ZNF500O60304 480 aaPredicted RBP16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 SH3D19Q5HYK7 790 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 FIBCD1Q8N539 461 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 GIPC2Q8TF65 315 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 ZNF558Q96NG5 402 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 EMILIN2Q9BXX0 1053 aa16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.54■□□□□ 0.244e-9■■■□□ 14.9
PPFIA1-222ENST00000532504 TRPM3Q9HCF6 1732 aaPredicted RBP16.54■□□□□ 0.24
PPFIA1-222ENST00000532504 STRCQ7RTU9 1775 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 ATICP31939 592 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 ABRAQ8N0Z2 381 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 TEPSINQ96N21 525 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 ERGIC2Q96RQ1 377 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 TLK1Q9UKI8 766 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 KCNA2P16389 499 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 PTPN11Q06124 597 aaPredicted RBP16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 TRIM59Q8IWR1 403 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 ARHGAP18Q8N392 663 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 DEPDC1BQ8WUY9 529 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 RPRD1AQ96P16 312 aaPredicted RBP16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 NUDCD1Q96RS6 583 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 PCDHB5Q9Y5E4 795 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 SLC4A7Q9Y6M7 1214 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 TTLL13PA6NNM8 815 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 CDH18Q13634 790 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 SLC39A12Q504Y0 691 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 CDKL3Q8IVW4 592 aaPredicted RBP16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 SAYSD1Q9NPB0 183 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 SMPD4Q9NXE4 827 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 SSU72P8A0A1W2PR75 194 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 PLEKP08567 350 aaPredicted RBP16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 ETFBP38117 255 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 PRMT2P55345 433 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 EIF3EP60228 445 aaKnown RBP16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 CENPUQ71F23 418 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 FAM118BQ9BPY3 351 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 IRX2Q9BZI1 471 aaPredicted RBP16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 GOLPH3Q9H4A6 298 aa16.53■□□□□ 0.24
PPFIA1-222ENST00000532504 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.53■□□□□ 0.242e-6■■■■□ 20.6
PPFIA1-222ENST00000532504 PPP1R12AO14974 1030 aaPredicted RBP16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 ACSL3O95573 720 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 ZFXP17010 805 aaPredicted RBP16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 BCAT1P54687 386 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 GPS1Q13098 491 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 PIGHQ14442 188 aaPredicted RBP16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 TMED2Q15363 201 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 ANO4Q32M45 955 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 NOMO2Q5JPE7 1267 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 ZNF677Q86XU0 584 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 ATPAF2Q8N5M1 289 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 TMEM161BQ8NDZ6 487 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 RILPQ96NA2 401 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 TRIM10Q9UDY6 481 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 DIS3Q9Y2L1 958 aaKnown RBP16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 CRYBG1Q9Y4K1 1723 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 USP27XA6NNY8 438 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 H0Y626 953 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 RPS6KA2Q15349 733 aa16.52■□□□□ 0.24
PPFIA1-222ENST00000532504 ECM1Q16610 540 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms