RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 EBF3Q9H4W6 596 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 GKN1Q9NS71 199 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 CNTN3Q9P232 1028 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 ANKFY1Q9P2R3 1169 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 PCDHB8Q9UN66 801 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 ADAMTS20P59510 1910 aa9.79□□□□□ -0.84
USF1-210ENST00000531842 MYO18AQ92614 2054 aaKnown RBP9.78□□□□□ -0.84
USF1-210ENST00000531842 LNP1A1A4G5 178 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 MTMR11A4FU01 709 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 SRRM3A6NNA2 597 aaPredicted RBP9.78□□□□□ -0.84
USF1-210ENST00000531842 DPYSL4O14531 572 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 HIP1RO75146 1068 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 ZIC2O95409 532 aaPredicted RBP9.78□□□□□ -0.84
USF1-210ENST00000531842 KCNE1P15382 129 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 ATF6P18850 670 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 PROZP22891 400 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 CDC25AP30304 524 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 CCT6AP40227 531 aaKnown RBP9.78□□□□□ -0.84
USF1-210ENST00000531842 ST3GAL1Q11201 340 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 MAPK7Q13164 816 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 PLD1Q13393 1074 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 CENPPQ6IPU0 288 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 KCNK18Q7Z418 384 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 FAM177A1Q8N128 213 aaPredicted RBP9.78□□□□□ -0.84
USF1-210ENST00000531842 DDX1Q92499 740 aaKnown RBP9.78□□□□□ -0.84
USF1-210ENST00000531842 IFT74Q96LB3 600 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 TCHPQ9BT92 498 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 SCNM1Q9BWG6 230 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 SLC46A2Q9BY10 475 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 TPSD1Q9BZJ3 242 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 TM6SF1Q9BZW5 370 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 IL21Q9HBE4 155 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 SLC8A2Q9UPR5 921 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 KIAA1024Q9UPX6 916 aa9.78□□□□□ -0.84
USF1-210ENST00000531842 HELZP42694 1942 aaKnown RBP9.78□□□□□ -0.84
USF1-210ENST00000531842 EPB41L2O43491 1005 aaKnown RBP9.77□□□□□ -0.85
USF1-210ENST00000531842 BCKDHBP21953 392 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 RPA1P27694 616 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 MARCKSP29966 332 aaPredicted RBP9.77□□□□□ -0.85
USF1-210ENST00000531842 GPR15P49685 360 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 EFNA5P52803 228 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 EPHB3P54753 998 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 YWHAHQ04917 246 aaPredicted RBP9.77□□□□□ -0.85
USF1-210ENST00000531842 RING1Q06587 406 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 PPP2R5AQ15172 486 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 ME3Q16798 604 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 UAP1L1Q3KQV9 507 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 ITPRIPL2Q3MIP1 535 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 ARHGAP29Q52LW3 1261 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 TMEM196Q5HYL7 178 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 SDHAF4Q5VUM1 108 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 NSUN7Q8NE18 718 aaKnown RBP9.77□□□□□ -0.85
USF1-210ENST00000531842 DEFB124Q8NES8 71 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 OR10T2Q8NGX3 314 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 RPLP0P6Q8NHW5 317 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 BPIFB1Q8TDL5 484 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 GATA6Q92908 595 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 SEPT5Q99719 369 aaPredicted RBP9.77□□□□□ -0.85
USF1-210ENST00000531842 ADAM33Q9BZ11 813 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 FSCN3Q9NQT6 498 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 TOPORSQ9NS56 1045 aaPredicted RBP9.77□□□□□ -0.85
USF1-210ENST00000531842 DDX19AQ9NUU7 478 aaKnown RBP9.77□□□□□ -0.85
USF1-210ENST00000531842 SLC38A7Q9NVC3 462 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 PHLPP2Q6ZVD8 1323 aa9.77□□□□□ -0.85
USF1-210ENST00000531842 NPHP3-ACAD11A0A0J9YXS1 232 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 M0QZQ0 153 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 CDX4O14627 284 aaPredicted RBP9.76□□□□□ -0.85
USF1-210ENST00000531842 HYAL3O43820 417 aaPredicted RBP9.76□□□□□ -0.85
USF1-210ENST00000531842 OAZ2O95190 189 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 CAVIN2O95810 425 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 MCF2P10911 925 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 HOXA6P31267 233 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 GBP1P32455 592 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 RPL9P32969 192 aaKnown RBP9.76□□□□□ -0.85
USF1-210ENST00000531842 ALDH1A3P47895 512 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 GALK1P51570 392 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 MLLT6P55198 1093 aaPredicted RBP9.76□□□□□ -0.85
USF1-210ENST00000531842 ACAP1Q15027 740 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 CCDC142Q17RM4 750 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 SLC39A12Q504Y0 691 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 MPZL3Q6UWV2 235 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 DSTYKQ6XUX3 929 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 TMEM150AQ86TG1 271 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 LRRTM3Q86VH5 581 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 SFTPA1Q8IWL2 248 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 FRMD1Q8N878 549 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 MAB21L3Q8N8X9 362 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 KDF1Q8NAX2 398 aaPredicted RBP9.76□□□□□ -0.85
USF1-210ENST00000531842 LEMD2Q8NC56 503 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 APPL2Q8NEU8 664 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 WASF1Q92558 559 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 USP13Q92995 863 aaPredicted RBP9.76□□□□□ -0.85
USF1-210ENST00000531842 PSMG2Q969U7 264 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 KIF12Q96FN5 646 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 MRPL4Q9BYD3 311 aaKnown RBP9.76□□□□□ -0.85
USF1-210ENST00000531842 BRMS1Q9HCU9 246 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 KMT5AQ9NQR1 393 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 VPS45Q9NRW7 570 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 ARHGAP28Q9P2N2 729 aa9.76□□□□□ -0.85
USF1-210ENST00000531842 KLK13Q9UKR3 277 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms