RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 RHOBTB3O94955 611 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 APOA4P06727 396 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 SNRPAP09012 282 aaKnown RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 HARS2P49590 506 aaKnown RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 SNAPC2Q13487 334 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 HIST2H2ACQ16777 129 aaPredicted RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 HIST2H2AA3Q6FI13 130 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 PRPF39Q86UA1 669 aaKnown RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 ZNF677Q86XU0 584 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 DPF2Q92785 391 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 NSUN4Q96CB9 384 aaKnown RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 DTNBP1Q96EV8 351 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 HPS4Q9NQG7 708 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 DYNC1LI2O43237 492 aaPredicted RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 WBP4O75554 376 aaKnown RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 ERFP50548 548 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 ATXN3P54252 364 aaPredicted RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 PRKCEQ02156 737 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 RIBC1Q8N443 379 aaPredicted RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 CINPQ9BW66 212 aaPredicted RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 GPR63Q9BZJ6 419 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 HEATR9A2RTY3 570 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 GRAP2O75791 330 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 MLNP12872 115 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 KCNA3P22001 575 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 PLOD1Q02809 727 aaPredicted RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 EFHC1Q5JVL4 640 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 HS6ST3Q8IZP7 471 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 TADA1Q96BN2 335 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 WNK4Q96J92 1243 aa13.52□□□□□ -0.25
MACF1-230ENST00000530275 XPO6Q96QU8 1125 aaKnown RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 MOV10L1Q9BXT6 1211 aaKnown RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 ROPN1BQ9BZX4 212 aaPredicted RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 ROPN1Q9HAT0 212 aaPredicted RBP13.52□□□□□ -0.25
MACF1-230ENST00000530275 EIF3HO15372 352 aaKnown RBP eCLIP13.51□□□□□ -0.256e-7■■■□□ 18.3
MACF1-230ENST00000530275 MAGEA4P43358 317 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 TMEM62Q0P6H9 643 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 RASGRP2Q7LDG7 609 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 SETD3Q86TU7 594 aaPredicted RBP13.51□□□□□ -0.25
MACF1-230ENST00000530275 TRIM69Q86WT6 500 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 MANSC1Q9H8J5 431 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 FAM49BQ9NUQ9 324 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 GRID1Q9ULK0 1009 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 FHOD1Q9Y613 1164 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 A0A1W2PQJ5 194 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 UPP2O95045 317 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 TCN1P20061 433 aaPredicted RBP13.51□□□□□ -0.25
MACF1-230ENST00000530275 SOX11P35716 441 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 UGT3A1Q6NUS8 523 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 LVRNQ6Q4G3 990 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 JAMLQ86YT9 394 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 GALNT4Q8N4A0 578 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 VPS50Q96JG6 964 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 PRPF18Q99633 342 aaKnown RBP13.51□□□□□ -0.25
MACF1-230ENST00000530275 THTPAQ9BU02 230 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 TBC1D23Q9NUY8 699 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 CDY2AQ9Y6F7 541 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 CDY1Q9Y6F8 540 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 TRPC5OSA6NMA1 111 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 PHF20L1A8MW92 1017 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 HLA-DRAP01903 254 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 ITGA8P53708 1063 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 ARHGAP15Q53QZ3 475 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 SGO1Q5FBB7 561 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 WLSQ5T9L3 541 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 DDX42Q86XP3 938 aaKnown RBP eCLIP13.51□□□□□ -0.25
MACF1-230ENST00000530275 ZNF280CQ8ND82 737 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 UBA3Q8TBC4 463 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 KRCC1Q9NPI7 259 aaPredicted RBP13.51□□□□□ -0.25
MACF1-230ENST00000530275 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.51□□□□□ -0.25
MACF1-230ENST00000530275 PCDHB7Q9Y5E2 793 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 PCSK1P29120 753 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 DEFA1P59665 94 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 DEFA3P59666 94 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 FMR1Q06787 632 aaKnown RBP eCLIP13.51□□□□□ -0.251e-9■■■■■ 34
MACF1-230ENST00000530275 TBL3Q12788 808 aaKnown RBP13.51□□□□□ -0.25
MACF1-230ENST00000530275 C3orf62Q6ZUJ4 267 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 IFNEQ86WN2 208 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 PPIL6Q8IXY8 311 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 ZNF513Q8N8E2 541 aaPredicted RBP13.51□□□□□ -0.25
MACF1-230ENST00000530275 VPS37AQ8NEZ2 397 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 SPATA18Q8TC71 538 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 GOLPH3Q9H4A6 298 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 IL1RL2Q9HB29 575 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 DAGLAQ9Y4D2 1042 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 UBXN8O00124 270 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 TAF1CQ15572 869 aaPredicted RBP13.51□□□□□ -0.25
MACF1-230ENST00000530275 IYDQ6PHW0 289 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 LINC00523Q86TU6 105 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 INPP5DQ92835 1189 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 SEC16BQ96JE7 1060 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 C9orf72Q96LT7 481 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 ZFYVE28Q9HCC9 887 aa13.51□□□□□ -0.25
MACF1-230ENST00000530275 ZCCHC17Q9NP64 241 aaKnown RBP13.51□□□□□ -0.25
MACF1-230ENST00000530275 TNS3Q68CZ2 1445 aa13.5□□□□□ -0.25
MACF1-230ENST00000530275 DGKIO75912 1065 aa13.5□□□□□ -0.25
MACF1-230ENST00000530275 TMEM253P0C7T8 217 aa13.5□□□□□ -0.25
MACF1-230ENST00000530275 CHRM3P20309 590 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms