RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 RAD51AP2Q09MP3 1159 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 VEPH1Q14D04 833 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 SF3A2Q15428 464 aaKnown RBP17.45■□□□□ 0.38
COL16A1-216ENST00000529928 CACNA2D4Q7Z3S7 1137 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 KCNK18Q7Z418 384 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 CCDC83Q8IWF9 413 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 TMEM130Q8N3G9 435 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 TTC9BQ8N6N2 239 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 BICD1Q96G01 975 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 TSPAN18Q96SJ8 248 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 TMEM209Q96SK2 561 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 TASP1Q9H6P5 420 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 GREB1Q4ZG55 1949 aa17.45■□□□□ 0.38
COL16A1-216ENST00000529928 H0YCG3 227 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 TM4SF5O14894 197 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 EXTL3O43909 919 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 ATG13O75143 517 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 EPN2O95208 641 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 CDC25AP30304 524 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 CDC25CP30307 473 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 PRPHP41219 470 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 RAP1GAPP47736 663 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 TUFMP49411 452 aaKnown RBP17.44■□□□□ 0.38
COL16A1-216ENST00000529928 MCM2P49736 904 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 SHC2P98077 582 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
COL16A1-216ENST00000529928 N4BP2L1Q5TBK1 243 aaPredicted RBP17.44■□□□□ 0.38
COL16A1-216ENST00000529928 DTHD1Q6ZMT9 781 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 KCTD17Q8N5Z5 321 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 GCNAQ96QF7 691 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 HAPLN2Q9GZV7 340 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 KCND2Q9NZV8 630 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 ZMYM5Q9UJ78 669 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 LIMCH1Q9UPQ0 1083 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 PCDHB6Q9Y5E3 794 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 CHD8Q9HCK8 2581 aa17.44■□□□□ 0.38
COL16A1-216ENST00000529928 LACTBL1A8MY62 500 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 SOAT2O75908 522 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 AKAP3O75969 853 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 CCDC192P0DO97 292 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL16A1-216ENST00000529928 HOXC13P31276 330 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 TNFSF9P41273 254 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 TOB1P50616 345 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-216ENST00000529928 LILRA4P59901 499 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 CYP4F8P98187 520 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 GRSF1Q12849 480 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL16A1-216ENST00000529928 SYT2Q8N9I0 419 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-216ENST00000529928 FAM184AQ8NB25 1140 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 SEPT5Q99719 369 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-216ENST00000529928 MMTAG2Q9BU76 263 aaKnown RBP17.43■□□□□ 0.38
COL16A1-216ENST00000529928 LARSQ9P2J5 1176 aaKnown RBP17.43■□□□□ 0.38
COL16A1-216ENST00000529928 SLC8A2Q9UPR5 921 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 PCDHGA5Q9Y5G8 931 aa17.43■□□□□ 0.38
COL16A1-216ENST00000529928 PXNP49023 591 aaPredicted RBP17.42■□□□□ 0.38
COL16A1-216ENST00000529928 LIG4P49917 911 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 GUCY2FP51841 1108 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 NCKAP1LP55160 1127 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 ZRSR1Q15695 479 aaKnown RBP17.42■□□□□ 0.38
COL16A1-216ENST00000529928 CCDC6Q16204 474 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 ENOX2Q16206 610 aaKnown RBP17.42■□□□□ 0.38
COL16A1-216ENST00000529928 TAF12Q16514 161 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 IL17AQ16552 155 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 C8orf34Q49A92 452 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 TMEM196Q5HYL7 178 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 STPG1Q5TH74 334 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 SPATA1Q5VX52 437 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 KBTBD6Q86V97 674 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 KCNN1Q92952 543 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 SENP8Q96LD8 212 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 LPIN3Q9BQK8 851 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 RPF1Q9H9Y2 349 aaKnown RBP17.42■□□□□ 0.38
COL16A1-216ENST00000529928 GKN1Q9NS71 199 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 RXFP3Q9NSD7 469 aa17.42■□□□□ 0.38
COL16A1-216ENST00000529928 USP24Q9UPU5 2620 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 PPEF2O14830 753 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 HNRNPDLO14979 420 aaKnown RBP17.41■□□□□ 0.38
COL16A1-216ENST00000529928 OGTO15294 1046 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 EIF5BO60841 1220 aaKnown RBP17.41■□□□□ 0.38
COL16A1-216ENST00000529928 CYP11A1P05108 521 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 ADRB2P07550 413 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 ATF6P18850 670 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 SCP2P22307 547 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 AMPD2Q01433 879 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 RUNX3Q13761 415 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 MGAT5BQ3V5L5 792 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 SLC39A12Q504Y0 691 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 PLA2G2CQ5R387 149 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 HYIQ5T013 277 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 PKN3Q6P5Z2 889 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 CD302Q8IX05 232 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 CMTM8Q8IZV2 173 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 CAMKK1Q8N5S9 505 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 OR10T2Q8NGX3 314 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 ZC3H10Q96K80 434 aaKnown RBP17.41■□□□□ 0.38
COL16A1-216ENST00000529928 FAM83CQ9BQN1 747 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 SLC46A2Q9BY10 475 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 IL21Q9HBE4 155 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 DSEQ9UL01 958 aa17.41■□□□□ 0.38
COL16A1-216ENST00000529928 MYH11P35749 1972 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms