RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 MUTYHQ9UIF7 546 aa7.73□□□□□ -1.17
ITGB1-218ENST00000528877 FBXO2Q9UK22 296 aaPredicted RBP7.73□□□□□ -1.17
ITGB1-218ENST00000528877 NR2E1Q9Y466 385 aa7.73□□□□□ -1.17
ITGB1-218ENST00000528877 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.73□□□□□ -1.17
ITGB1-218ENST00000528877 MYH15Q9Y2K3 1946 aa7.73□□□□□ -1.17
ITGB1-218ENST00000528877 PLXNA3P51805 1871 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 PDCD11Q14690 1871 aaKnown RBP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 TECTAO75443 2155 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 MEFVO15553 781 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 FAM189A1O60320 539 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 GLUD1P00367 558 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 PDIA4P13667 645 aaKnown RBP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 PLCG1P19174 1290 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 NASPP49321 788 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 IDH3AP50213 366 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 GRIN1Q05586 938 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 CCINQ13939 588 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 NOLC1Q14978 699 aaKnown RBP eCLIP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 KARSQ15046 597 aaKnown RBP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 PTPN21Q16825 1174 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 RTP2Q5QGT7 225 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 C16orf46Q6P387 395 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 TAS1R1Q7RTX1 841 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 GPR149Q86SP6 731 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 ZDHHC14Q8IZN3 488 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 CEP120Q8N960 986 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 RAD54LQ92698 747 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 EDAQ92838 391 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 FIZ1Q96SL8 496 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 PAAF1Q9BRP4 392 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 CCDC94Q9BW85 323 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 TARS2Q9BW92 718 aaKnown RBP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 CXCL16Q9H2A7 254 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 ST6GALNAC4Q9H4F1 302 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 PLEKHA4Q9H4M7 779 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 ZSCAN16Q9H4T2 348 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 SLC38A7Q9NVC3 462 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 ZDHHC7Q9NXF8 308 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 KLK14Q9P0G3 267 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 MTMR6Q9Y217 621 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 USP20Q9Y2K6 914 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 SRPRBQ9Y5M8 271 aaKnown RBP7.72□□□□□ -1.17
ITGB1-218ENST00000528877 CLIC4Q9Y696 253 aa7.72□□□□□ -1.17
ITGB1-218ENST00000528877 SMIM28A0A1B0GU29 152 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 CASTOR2A6NHX0 329 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 SLC16A4O15374 487 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 STX6O43752 255 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 MICAL2O94851 1124 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 SSBP05455 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
ITGB1-218ENST00000528877 KLRC2P26717 231 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 HOXA9P31269 272 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 CA8P35219 290 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 ADH7P40394 386 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 YARSP54577 528 aaKnown RBP7.71□□□□□ -1.18
ITGB1-218ENST00000528877 STRN3Q13033 797 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 SLC39A14Q15043 492 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 UPP1Q16831 310 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 RARS2Q5T160 578 aaKnown RBP7.71□□□□□ -1.18
ITGB1-218ENST00000528877 LILRA6Q6PI73 481 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 LINC00114Q6XXX2 140 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 RTL10Q7L3V2 364 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 BMP8AQ7Z5Y6 402 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 GPBP1Q86WP2 473 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 MAP4K3Q8IVH8 894 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 TDRD5Q8NAT2 981 aaKnown RBP7.71□□□□□ -1.18
ITGB1-218ENST00000528877 TMEM87AQ8NBN3 555 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 C3orf58Q8NDZ4 430 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 LARP4BQ92615 738 aaKnown RBP7.71□□□□□ -1.18
ITGB1-218ENST00000528877 BHMTQ93088 406 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 HVCN1Q96D96 273 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 IFT43Q96FT9 208 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 TSPAN18Q96SJ8 248 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 TTPALQ9BTX7 342 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 KCNH6Q9H252 994 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 PARVGQ9HBI0 331 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 POLD4Q9HCU8 107 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 MAN1C1Q9NR34 630 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 FAM13BQ9NYF5 915 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 CDH22Q9UJ99 828 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 FBXW11Q9UKB1 542 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 GDAQ9Y2T3 454 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 VWA8A3KMH1 1905 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 C2orf16Q68DN1 1984 aa7.71□□□□□ -1.18
ITGB1-218ENST00000528877 ZDBF2Q9HCK1 2354 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 MYH11P35749 1972 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 FRMD3A2A2Y4 597 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 FAM86C2PA6NEL3 165 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 C2CD4DB7Z1M9 353 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 HNRNPDLO14979 420 aaKnown RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 TGM5O43548 720 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 TRAPPC3O43617 180 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 TBCAO75347 108 aaKnown RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 TADA2AO75478 443 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 ADRB2P07550 413 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 HOXB4P17483 251 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 LIG1P18858 919 aa7.7□□□□□ -1.18
ITGB1-218ENST00000528877 BRD2P25440 801 aaKnown RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 RPL9P32969 192 aaKnown RBP7.7□□□□□ -1.18
ITGB1-218ENST00000528877 DDIT3P35638 169 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms