RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TBX20Q9UMR3 447 aa13.21□□□□□ -0.29
CAPN1-208ENST00000527323 ENO4A6NNW6 628 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 PROSCO94903 275 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 KRT10P13645 584 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 EPHB2P29323 1055 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 RPA3P35244 121 aaPredicted RBP13.21□□□□□ -0.3
CAPN1-208ENST00000527323 YARSP54577 528 aaKnown RBP13.21□□□□□ -0.3
CAPN1-208ENST00000527323 TAS2R40P59535 323 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 BAATQ14032 418 aaPredicted RBP13.21□□□□□ -0.3
CAPN1-208ENST00000527323 TMEM132BQ14DG7 1078 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 PARP6Q2NL67 630 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 LMBRD2Q68DH5 695 aaPredicted RBP13.21□□□□□ -0.3
CAPN1-208ENST00000527323 MIS18BP1Q6P0N0 1132 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 B3GNT9Q6UX72 402 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 CEP128Q6ZU80 1094 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 RIBC1Q8N443 379 aaPredicted RBP13.21□□□□□ -0.3
CAPN1-208ENST00000527323 FAM13CQ8NE31 585 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 BICD1Q96G01 975 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 LRMDAQ9H2I8 198 aa13.21□□□□□ -0.3
CAPN1-208ENST00000527323 ZMYND8Q9ULU4 1186 aaPredicted RBP13.21□□□□□ -0.3
CAPN1-208ENST00000527323 VWA5AO00534 786 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 PMM2O15305 246 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 WFS1O76024 890 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 IFNB1P01574 187 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 PGK2P07205 417 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 PDHA1P08559 390 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 UNGP13051 313 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-208ENST00000527323 CNTN2Q02246 1040 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 GPS1Q13098 491 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 BLMHQ13867 455 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 ZCCHC9Q8N567 271 aaKnown RBP13.2□□□□□ -0.3
CAPN1-208ENST00000527323 TRIM11Q96F44 468 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 TESPA1A2RU30 521 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-208ENST00000527323 CELF2O95319 508 aaKnown RBP13.2□□□□□ -0.3
CAPN1-208ENST00000527323 GJA5P36382 358 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 ATP13A4Q4VNC1 1196 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 LMNTD2Q8IXW0 634 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 STK32AQ8WU08 396 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 PPP1R13LQ8WUF5 828 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 FAM213AQ9BRX8 229 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 KMT5AQ9NQR1 393 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 AVENQ9NQS1 362 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-208ENST00000527323 CORO1CQ9ULV4 474 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-208ENST00000527323 COQ4Q9Y3A0 265 aa13.2□□□□□ -0.3
CAPN1-208ENST00000527323 FDX1P10109 184 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 MYBL1P10243 752 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 ETS1P14921 441 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 ABL2P42684 1182 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 ARSEP51690 589 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 SESN3P58005 492 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 SNRPFP62306 86 aaKnown RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 LMNB2Q03252 620 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 DMP1Q13316 513 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 FASTKD3Q14CZ7 662 aaKnown RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 TAF1BQ53T94 588 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 ZBED8Q8IZ13 594 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 GLIS1Q8NBF1 620 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 HAUS1Q96CS2 278 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 NPHS2Q9NP85 383 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 ZFP69BQ9UJL9 534 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 DCTN4Q9UJW0 460 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 AFG3L2Q9Y4W6 797 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 PCDHB2Q9Y5E7 798 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 GOLGA8SH3BPF8 625 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 GOLGA8MH3BSY2 632 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 ATP2A1O14983 1001 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 CALRP27797 417 aaKnown RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 IRX1P78414 480 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 KLF1Q13351 362 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 SLC1A5Q15758 541 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 NCAPG2Q86XI2 1143 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 UBN1Q9NPG3 1134 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 RNF146Q9NTX7 359 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 ZFATQ9P243 1243 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 FEM1BQ9UK73 627 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 DNPEPQ9ULA0 475 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 SMG5Q9UPR3 1016 aaKnown RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 USP20Q9Y2K6 914 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 A0A1W2PPM1 405 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 EDF1O60869 148 aaKnown RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 PEX11AO75192 247 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 ENTPD5O75356 428 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 PECAM1P16284 738 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 TNNI1P19237 187 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 NPTX2P47972 431 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 SOX10P56693 466 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 NOP14P78316 857 aaKnown RBP13.19□□□□□ -0.3
CAPN1-208ENST00000527323 CCDC6Q16204 474 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 PDK4Q16654 411 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 Q3C1V9 767 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 FYB2Q5VWT5 728 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 LVRNQ6Q4G3 990 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 ANKMY2Q8IV38 441 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 TTC8Q8TAM2 541 aa13.19□□□□□ -0.3
CAPN1-208ENST00000527323 TTC25Q96NG3 672 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms