RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 WEE2P0C1S8 567 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 ACO1P21399 889 aaKnown RBP11.55□□□□□ -0.56
NEDD8-205ENST00000527046 WARSP23381 471 aaKnown RBP11.55□□□□□ -0.56
NEDD8-205ENST00000527046 PIK3CAP42336 1068 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 RAP1GAPP47736 663 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 KLK7P49862 253 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 NOP14P78316 857 aaKnown RBP11.55□□□□□ -0.56
NEDD8-205ENST00000527046 MYL7Q01449 175 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 LRMPQ12912 555 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 MYO1EQ12965 1108 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 PTPN21Q16825 1174 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 DUSP6Q16828 381 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 PLPP4Q5VZY2 271 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 SLC8B1Q6J4K2 584 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 PDE12Q6L8Q7 609 aaKnown RBP11.55□□□□□ -0.56
NEDD8-205ENST00000527046 GJB7Q6PEY0 223 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 RNF214Q8ND24 703 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 TWNKQ96RR1 684 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 INTS2Q9H0H0 1204 aaKnown RBP11.55□□□□□ -0.56
NEDD8-205ENST00000527046 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
NEDD8-205ENST00000527046 MRPL17Q9NRX2 175 aaKnown RBP11.55□□□□□ -0.56
NEDD8-205ENST00000527046 TMLHEQ9NVH6 421 aa11.55□□□□□ -0.56
NEDD8-205ENST00000527046 NXF1Q9UBU9 619 aaKnown RBP11.55□□□□□ -0.56
NEDD8-205ENST00000527046 A0A1B0GTH6 734 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 LGALS16A8MUM7 142 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 RNF225M0QZC1 329 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-205ENST00000527046 EPHB6O15197 1021 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 LINC01565O15544 149 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 GLP2RO95838 553 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 OR4Q2P0C623 313 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 PRKCSHP14314 528 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-205ENST00000527046 LTBRP36941 435 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 PBX1P40424 430 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 ADAM15Q13444 863 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 RAB33AQ14088 237 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 SMC1AQ14683 1233 aaKnown RBP11.54□□□□□ -0.56
NEDD8-205ENST00000527046 PSMD5Q16401 504 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 CTC1Q2NKJ3 1217 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 ZNF699Q32M78 642 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 ZNF667Q5HYK9 610 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 FAM171BQ6P995 826 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 TRIM65Q6PJ69 517 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 ANKS3Q6ZW76 656 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 RBM23Q86U06 439 aaKnown RBP11.54□□□□□ -0.56
NEDD8-205ENST00000527046 APPL2Q8NEU8 664 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 MICAL1Q8TDZ2 1067 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 FAXDC2Q96IV6 333 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 NAA15Q9BXJ9 866 aaKnown RBP11.54□□□□□ -0.56
NEDD8-205ENST00000527046 ZCWPW1Q9H0M4 648 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 CRISPLD1Q9H336 500 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 NSUN3Q9H649 340 aaKnown RBP11.54□□□□□ -0.56
NEDD8-205ENST00000527046 CRTAC1Q9NQ79 661 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 MAGEC2Q9UBF1 373 aaPredicted RBP11.54□□□□□ -0.56
NEDD8-205ENST00000527046 HMGXB4Q9UGU5 601 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 STXBP5LQ9Y2K9 1186 aa11.54□□□□□ -0.56
NEDD8-205ENST00000527046 MTCL1Q9Y4B5 1905 aaKnown RBP11.54□□□□□ -0.56
NEDD8-205ENST00000527046 WDR27A2RRH5 827 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 MYBPHLA2RUH7 354 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 BECN2A8MW95 431 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 N4BP1O75113 896 aaKnown RBP11.53□□□□□ -0.56
NEDD8-205ENST00000527046 PAPLNO95428 1278 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 SEC24AO95486 1093 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 URODP06132 367 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 ODC1P11926 461 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 ACAT1P24752 427 aaKnown RBP11.53□□□□□ -0.56
NEDD8-205ENST00000527046 OR1D2P34982 312 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 CLCN4P51793 760 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 CDR1P51861 262 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 FANCCQ00597 558 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 ROR1Q01973 937 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 YWHAHQ04917 246 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-205ENST00000527046 DLX2Q07687 328 aaPredicted RBP11.53□□□□□ -0.56
NEDD8-205ENST00000527046 INCA1Q0VD86 236 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 GPR17Q13304 367 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 PTPROQ16827 1216 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 CTXN3Q4LDR2 81 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 OVOS1Q6IE37 1185 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 TMEM184AQ6ZMB5 413 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 RNF19BQ6ZMZ0 732 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 PAQR9Q6ZVX9 377 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 RRAGAQ7L523 313 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 ADGRF2Q8IZF7 708 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 CRYBG2Q8N1P7 616 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 TMEM86AQ8N2M4 240 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 SPATA18Q8TC71 538 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 ERGIC2Q96RQ1 377 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 ZSWIM1Q9BR11 485 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 ACBD6Q9BR61 282 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 GPR88Q9GZN0 384 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 ELOVL4Q9GZR5 314 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 NIF3L1Q9GZT8 377 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 GANQ9H2C0 597 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 DPEP3Q9H4B8 488 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 ENTPD7Q9NQZ7 604 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 DDX43Q9NXZ2 648 aaKnown RBP11.53□□□□□ -0.56
NEDD8-205ENST00000527046 STK39Q9UEW8 545 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 DSEQ9UL01 958 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 CNTN6Q9UQ52 1028 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 CDY1Q9Y6F8 540 aa11.53□□□□□ -0.56
NEDD8-205ENST00000527046 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms