RNA–Protein interactions for RNA: ENST00000526369.3

PPFIA1-208, Transcript of PTPRF interacting protein alpha 1, human

TSL 4

Gene PPFIA1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-208	ENST00000526369	SGSM1	Q2NKQ1	1148 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	DPY19L2P1	Q6NXN4	242 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	TRAPPC11	Q7Z392	1133 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	RBM23	Q86U06	439 aa	Known RBP	11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	BEST2	Q8NFU1	509 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	OR5B17	Q8NGF7	314 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	KIF12	Q96FN5	646 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	SNX27	Q96L92	541 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	TSPAN18	Q96SJ8	248 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PHOX2B	Q99453	314 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PLEKHA5	Q9HAU0	1116 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	DNAI1	Q9UI46	699 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	GUCA1B	Q9UMX6	200 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PCDHA13	Q9Y5I0	950 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	MRPL42	Q9Y6G3	142 aa	Known RBP	11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CIT	O14578	2027 aa		11.14	□□□□□ -0.63
PPFIA1-208	ENST00000526369	LACTBL1	A8MY62	500 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	TACC1	O75410	805 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ASS1	P00966	412 aa	Known RBP	11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PNMA6A	P0CW24	399 aa	Predicted RBP	11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ZSCAN20	P17040	1043 aa	Predicted RBP	11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ATF7	P17544	494 aa	Predicted RBP	11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	TNFAIP3	P21580	790 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	DNAJB1	P25685	340 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ATIC	P31939	592 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	RAB27A	P51159	221 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	NAP1L1	P55209	391 aa	Known RBP	11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	WNT7B	P56706	349 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	MGAT3	Q09327	533 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	MYO1E	Q12965	1108 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ADAM15	Q13444	863 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ZNF667	Q5HYK9	610 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	FBXO47	Q5MNV8	452 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	JADE1	Q6IE81	842 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PPP1R2P3	Q6NXS1	205 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	SYT10	Q6XYQ8	523 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ADGRD2	Q7Z7M1	963 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	FAM228A	Q86W67	206 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ZNF677	Q86XU0	584 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	EFCAB13	Q8IY85	973 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	TRIM58	Q8NG06	486 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	HELQ	Q8TDG4	1101 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CLP1	Q92989	425 aa	Known RBP	11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PBXIP1	Q96AQ6	731 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	FAXDC2	Q96IV6	333 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ZNF560	Q96MR9	790 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	RPS6KC1	Q96S38	1066 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PI4K2A	Q9BTU6	479 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	GPR88	Q9GZN0	384 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	DNAI2	Q9GZS0	605 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	AGO3	Q9H9G7	860 aa	Known RBP	11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ADAMTS1	Q9UHI8	967 aa		11.13	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PIEZO1	Q92508	2521 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	MACROD2	A1Z1Q3	448 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CTAGE9	A4FU28	777 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	DGKI	O75912	1065 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	RECQL4	O94761	1208 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	VNN1	O95497	513 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	NRIP1	P48552	1158 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	GATM	P50440	423 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	TNNC1	P63316	161 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CYP27A1	Q02318	531 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CAMK1	Q14012	370 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ASTE1	Q2TB18	679 aa	Predicted RBP	11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ZNF569	Q5MCW4	686 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	IER5L	Q5T953	404 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ALKBH5	Q6P6C2	394 aa	Known RBP	11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	IRF2BP2	Q7Z5L9	587 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	FAM71A	Q8IYT1	594 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	TTC39C	Q8N584	583 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	KLHL23	Q8NBE8	558 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	MICAL1	Q8TDZ2	1067 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	EPS8L1	Q8TE68	723 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	TMEM40	Q8WWA1	233 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	LINC01599	Q8WXQ3	324 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ZNF516	Q92618	1163 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	EDA	Q92838	391 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PPP2R3C	Q969Q6	453 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	ZNF689	Q96CS4	500 aa	Predicted RBP	11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	KREMEN1	Q96MU8	473 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	NOX5	Q96PH1	765 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	APOL6	Q9BWW8	343 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PLVAP	Q9BX97	442 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	KCNH6	Q9H252	994 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PDCL3	Q9H2J4	239 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	NXF3	Q9H4D5	531 aa	Known RBP	11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	RC3H2	Q9HBD1	1191 aa	Known RBP	11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CHST12	Q9NRB3	414 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	SNTG2	Q9NY99	539 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	CNTN3	Q9P232	1028 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PARP2	Q9UGN5	583 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	INTU	Q9ULD6	942 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	UBQLN1	Q9UMX0	589 aa	Known RBP	11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	REXO2	Q9Y3B8	237 aa	Known RBP	11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PCDHB4	Q9Y5E5	795 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PCDHGC5	Q9Y5F6	944 aa		11.12	□□□□□ -0.63
PPFIA1-208	ENST00000526369	PDCD11	Q14690	1871 aa	Known RBP	11.11	□□□□□ -0.63

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