RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 TWNKQ96RR1 684 aa16.22■□□□□ 0.19
BEST1-204ENST00000524926 CYP3A43Q9HB55 503 aa16.22■□□□□ 0.19
BEST1-204ENST00000524926 HMGXB4Q9UGU5 601 aa16.22■□□□□ 0.19
BEST1-204ENST00000524926 USTQ9Y2C2 406 aa16.22■□□□□ 0.19
BEST1-204ENST00000524926 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.22■□□□□ 0.19
BEST1-204ENST00000524926 H3BQF6 201 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 PAEPP09466 180 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 HSPA6P17066 643 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 SSR1P43307 286 aaKnown RBP16.21■□□□□ 0.19
BEST1-204ENST00000524926 HSP90B2PQ58FF3 399 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 MFSD14CQ5VZR4 134 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 DENND1BQ6P3S1 775 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 SLC13A5Q86YT5 568 aaPredicted RBP16.21■□□□□ 0.19
BEST1-204ENST00000524926 SLC4A11Q8NBS3 891 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 WHAMMQ8TF30 809 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 TMEM176AQ96HP8 235 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 ZMAT2Q96NC0 199 aaKnown RBP16.21■□□□□ 0.19
BEST1-204ENST00000524926 NXF3Q9H4D5 531 aaKnown RBP16.21■□□□□ 0.19
BEST1-204ENST00000524926 RNF19AQ9NV58 838 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 TRIP11Q15643 1979 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 CILPO75339 1184 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 AKAP5P24588 427 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 FLT3LGP49771 235 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 RPL7AP62424 266 aaKnown RBP16.21■□□□□ 0.19
BEST1-204ENST00000524926 MYO1EQ12965 1108 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 GLRA4Q5JXX5 417 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 CYP4F22Q6NT55 531 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 DNAJC24Q6P3W2 148 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 DPH6Q7L8W6 267 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 DDX42Q86XP3 938 aaKnown RBP eCLIP16.21■□□□□ 0.19
BEST1-204ENST00000524926 TRIB2Q92519 343 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 ELOVL4Q9GZR5 314 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 MTUS1Q9ULD2 1270 aa16.21■□□□□ 0.19
BEST1-204ENST00000524926 UTP11Q9Y3A2 253 aaKnown RBP16.21■□□□□ 0.19
BEST1-204ENST00000524926 PGK1P00558 417 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 FAM153BP0C7A2 387 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 AXLP30530 894 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 CRYBB1P53674 252 aaPredicted RBP16.2■□□□□ 0.18
BEST1-204ENST00000524926 DR1Q01658 176 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 PTPN11Q06124 597 aaPredicted RBP16.2■□□□□ 0.18
BEST1-204ENST00000524926 FAM153CQ494X1 144 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 CYP4A22Q5TCH4 519 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 DCUN1D2Q6PH85 259 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 CAVIN3Q969G5 261 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 MAGOHBQ96A72 148 aaKnown RBP16.2■□□□□ 0.18
BEST1-204ENST00000524926 SNX27Q96L92 541 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 HEXIM2Q96MH2 286 aaKnown RBP16.2■□□□□ 0.18
BEST1-204ENST00000524926 FAM153AQ9UHL3 310 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 TCRBV7S2A1N4TA0A589 114 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 RECQL4O94761 1208 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 CDH5P33151 784 aaPredicted RBP16.2■□□□□ 0.18
BEST1-204ENST00000524926 FAM193AP78312 1265 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 SMYD5Q6GMV2 418 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 CXCL17Q6UXB2 119 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 NME8Q8N427 588 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 PRELID2Q8N945 189 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 LHX5Q9H2C1 402 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 IP6K2Q9UHH9 426 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 DERAQ9Y315 318 aa16.2■□□□□ 0.18
BEST1-204ENST00000524926 TMEM88BA6NKF7 163 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 PHF2O75151 1096 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 CYBAP13498 195 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 CUL1Q13616 776 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 ZDHHC14Q8IZN3 488 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 BEST2Q8NFU1 509 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 C18orf25Q96B23 403 aaPredicted RBP16.19■□□□□ 0.18
BEST1-204ENST00000524926 C18orf8Q96DM3 657 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 MCEEQ96PE7 176 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 TRIM31Q9BZY9 425 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 GPBP1L1Q9HC44 474 aaPredicted RBP16.19■□□□□ 0.18
BEST1-204ENST00000524926 KLK14Q9P0G3 267 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 TUBGCP4Q9UGJ1 667 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 BARX2Q9UMQ3 279 aaPredicted RBP16.19■□□□□ 0.18
BEST1-204ENST00000524926 TMEM191CA6NGB0 347 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 DAPK3O43293 454 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 KPNA6O60684 536 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 STAU1O95793 577 aaKnown RBP16.19■□□□□ 0.18
BEST1-204ENST00000524926 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
BEST1-204ENST00000524926 GJC1P36383 396 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 NDST1P52848 882 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 RHOT1Q8IXI2 618 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 TRIM51Q9BSJ1 452 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 MTG1Q9BT17 334 aaPredicted RBP16.19■□□□□ 0.18
BEST1-204ENST00000524926 DPH5Q9H2P9 285 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 SPC25Q9HBM1 224 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 PARP2Q9UGN5 583 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 SNX9Q9Y5X1 595 aa16.19■□□□□ 0.18
BEST1-204ENST00000524926 GOLGA6BA6NDN3 693 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 O00370 1275 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 RARAP10276 462 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 CHRNA3P32297 505 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 GJA9P57773 515 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 TAS2R40P59535 323 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 NNTQ13423 1086 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 CCDC50Q8IVM0 306 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 DDX27Q96GQ7 796 aaKnown RBP16.18■□□□□ 0.18
BEST1-204ENST00000524926 RAB17Q9H0T7 212 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 SYNCQ9H7C4 482 aa16.18■□□□□ 0.18
BEST1-204ENST00000524926 PRDM10Q9NQV6 1147 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms