RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 ACAD9Q9H845 621 aa18.9■□□□□ 0.62
IKBKB-228ENST00000523517 DRG1Q9Y295 367 aaKnown RBP18.9■□□□□ 0.62
IKBKB-228ENST00000523517 TCRBV5S1A1TA0A578 114 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 F8VP50 259 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 ATG7O95352 703 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 ETS1P14921 441 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 PECAM1P16284 738 aaPredicted RBP18.89■□□□□ 0.61
IKBKB-228ENST00000523517 TGFB2P61812 414 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 GPS1Q13098 491 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 CCDC142Q17RM4 750 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 RNF43Q68DV7 783 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 DNAJC24Q6P3W2 148 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 TRABD2AQ86V40 505 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 TDRPQ86YL5 185 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 MCEEQ96PE7 176 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 TEX13BQ9BXU2 312 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 IMPG2Q9BZV3 1241 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 PDGFDQ9GZP0 370 aaPredicted RBP18.89■□□□□ 0.61
IKBKB-228ENST00000523517 UBN1Q9NPG3 1134 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 KLHL14Q9P2G3 628 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 PNMA3Q9UL41 463 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.89■□□□□ 0.61
IKBKB-228ENST00000523517 IGF2BP3O00425 579 aaKnown RBP eCLIP18.89■□□□□ 0.61
IKBKB-228ENST00000523517 LSM8O95777 96 aaKnown RBP18.89■□□□□ 0.61
IKBKB-228ENST00000523517 HARSP12081 509 aaKnown RBP18.89■□□□□ 0.61
IKBKB-228ENST00000523517 HMGCS2P54868 508 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 KLHL29Q96CT2 875 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 TMEM134Q9H6X4 195 aa18.89■□□□□ 0.61
IKBKB-228ENST00000523517 ASS1P00966 412 aaKnown RBP18.88■□□□□ 0.61
IKBKB-228ENST00000523517 CST3P01034 146 aaPredicted RBP18.88■□□□□ 0.61
IKBKB-228ENST00000523517 PTPRAP18433 802 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 OGDHQ02218 1023 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 MORF4L2Q15014 288 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 NIFKQ9BYG3 293 aaKnown RBP18.88■□□□□ 0.61
IKBKB-228ENST00000523517 PITPNM3Q9BZ71 974 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 PICK1Q9NRD5 415 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 hCG_1818297A0A087WSY0 165 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 ATP2A1O14983 1001 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 SPAG7O75391 227 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 IBSPP21815 317 aaPredicted RBP18.88■□□□□ 0.61
IKBKB-228ENST00000523517 PTPN7P35236 360 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 ALDH5A1P51649 535 aaPredicted RBP18.88■□□□□ 0.61
IKBKB-228ENST00000523517 VCPP55072 806 aaKnown RBP18.88■□□□□ 0.61
IKBKB-228ENST00000523517 MGAT5Q09328 741 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 ACVR2BQ13705 512 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 FASTKD3Q14CZ7 662 aaKnown RBP18.88■□□□□ 0.61
IKBKB-228ENST00000523517 TXNRD3NBQ6F5E7 133 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 DCUN1D2Q6PH85 259 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 GPATCH11Q8N954 259 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 C12orf42Q96LP6 360 aa18.88■□□□□ 0.61
IKBKB-228ENST00000523517 PAIP2Q9BPZ3 127 aaKnown RBP18.88■□□□□ 0.61
IKBKB-228ENST00000523517 POC1B-GALNT4F8VUJ3 575 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 ASMTLO95671 621 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 BRD2P25440 801 aaKnown RBP18.87■□□□□ 0.61
IKBKB-228ENST00000523517 AP3M2P53677 418 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 IRX3P78415 501 aaPredicted RBP18.87■□□□□ 0.61
IKBKB-228ENST00000523517 OASLQ15646 514 aaKnown RBP18.87■□□□□ 0.61
IKBKB-228ENST00000523517 HP1BP3Q5SSJ5 553 aaPredicted RBP18.87■□□□□ 0.61
IKBKB-228ENST00000523517 RNASEH2BQ5TBB1 312 aaKnown RBP18.87■□□□□ 0.61
IKBKB-228ENST00000523517 ECHDC2Q86YB7 292 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 BRSK2Q8IWQ3 736 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 TMEM35BQ8NCS4 154 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 GIMAP7Q8NHV1 300 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 DENND1AQ8TEH3 1009 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 JDP2Q8WYK2 163 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 NKD2Q969F2 451 aaPredicted RBP18.87■□□□□ 0.61
IKBKB-228ENST00000523517 TBC1D31Q96DN5 1066 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 ARHGEF3Q9NR81 526 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 HACL1Q9UJ83 578 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 ARID2Q68CP9 1835 aa18.87■□□□□ 0.61
IKBKB-228ENST00000523517 ALOX15BO15296 676 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 MAGEB2O15479 319 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 PRPF4O43172 522 aaKnown RBP eCLIP18.86■□□□□ 0.612e-6■■□□□ 11.9
IKBKB-228ENST00000523517 ICAM3P32942 547 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 PIGHQ14442 188 aaPredicted RBP18.86■□□□□ 0.61
IKBKB-228ENST00000523517 STXBP2Q15833 593 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 TFDP3Q5H9I0 405 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 DCAF15Q66K64 600 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 FAM47EQ6ZV65 393 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 KIF2BQ8N4N8 673 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 ACSF2Q96CM8 615 aaPredicted RBP18.86■□□□□ 0.61
IKBKB-228ENST00000523517 HAUS1Q96CS2 278 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 TRABDQ9H4I3 376 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 VPS37BQ9H9H4 285 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 DDX56Q9NY93 547 aaKnown RBP18.86■□□□□ 0.61
IKBKB-228ENST00000523517 FER1L6Q2WGJ9 1857 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 ADCY3O60266 1144 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 ITGAVP06756 1048 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 ALADP13716 330 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 RFC5P40937 340 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 TNFSF9P41273 254 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 CDKN2BP42772 138 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 SLC18A1P54219 525 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 TAP1Q03518 808 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 PDE4CQ08493 712 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 CCDC15Q0P6D6 951 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 CAPSQ13938 189 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 PKN2Q16513 984 aaKnown RBP18.86■□□□□ 0.61
IKBKB-228ENST00000523517 PPP1R15BQ5SWA1 713 aa18.86■□□□□ 0.61
IKBKB-228ENST00000523517 ASRGL1Q7L266 308 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms