RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-223ENST00000522746 PARVAQ9NVD7 372 aa17.69■□□□□ 0.42
FAM49B-223ENST00000522746 UTP11Q9Y3A2 253 aaKnown RBP17.69■□□□□ 0.42
FAM49B-223ENST00000522746 HTTP42858 3142 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 TRIP11Q15643 1979 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 RARAP10276 462 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 CDH5P33151 784 aaPredicted RBP17.68■□□□□ 0.42
FAM49B-223ENST00000522746 TAS2R40P59535 323 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 EIF1ADQ8N9N8 165 aaKnown RBP17.68■□□□□ 0.42
FAM49B-223ENST00000522746 FEZF2Q8TBJ5 459 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 DNAJB3Q8WWF6 145 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 SOCS4Q8WXH5 440 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 SEC14L1Q92503 715 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 TRIB2Q92519 343 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 MAGOHBQ96A72 148 aaKnown RBP17.68■□□□□ 0.42
FAM49B-223ENST00000522746 KIF12Q96FN5 646 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 DDX27Q96GQ7 796 aaKnown RBP17.68■□□□□ 0.42
FAM49B-223ENST00000522746 HPDLQ96IR7 371 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 DPP3Q9NY33 737 aa17.68■□□□□ 0.42
FAM49B-223ENST00000522746 TRIP12Q14669 1992 aaPredicted RBP17.68■□□□□ 0.42
FAM49B-223ENST00000522746 HAS3O00219 553 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 TREHO43280 583 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 RNF40O75150 1001 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 CALB1P05937 261 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 ATICP31939 592 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 ADAM17P78536 824 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 ELOVL4Q9GZR5 314 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 VRTNQ9H8Y1 702 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 SNTG2Q9NY99 539 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 USTQ9Y2C2 406 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 C2CD2Q9Y426 696 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 TCRBV5S1A1TA0A578 114 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 EIF4BP23588 611 aaKnown RBP17.67■□□□□ 0.42
FAM49B-223ENST00000522746 CHRNA3P32297 505 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 PTGIRP43119 386 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 CPT1AP50416 773 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 DCAF4L1Q3SXM0 396 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 CYP4A22Q5TCH4 519 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 JAMLQ86YT9 394 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 SLC4A11Q8NBS3 891 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 HERPUD2Q9BSE4 406 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 ZNF518BQ9C0D4 1074 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.67■□□□□ 0.42
FAM49B-223ENST00000522746 CYTH4Q9UIA0 394 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 ITGA11Q9UKX5 1188 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 HES2Q9Y543 173 aa17.67■□□□□ 0.42
FAM49B-223ENST00000522746 CILPO75339 1184 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 DARSP14868 501 aaKnown RBP17.66■□□□□ 0.42
FAM49B-223ENST00000522746 FLT3P36888 993 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 FLT3LGP49771 235 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 DHX34Q14147 1143 aaKnown RBP17.66■□□□□ 0.42
FAM49B-223ENST00000522746 SLC27A1Q6PCB7 646 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 CCDC137Q6PK04 289 aaKnown RBP17.66■□□□□ 0.42
FAM49B-223ENST00000522746 ERICH1Q86X53 443 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 MREGQ8N565 214 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.66■□□□□ 0.42
FAM49B-223ENST00000522746 TMEM40Q8WWA1 233 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.66■□□□□ 0.428e-7■■■■□ 21.1
FAM49B-223ENST00000522746 ZIM3Q96PE6 472 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 MCEEQ96PE7 176 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 AP5M1Q9H0R1 490 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 TJP2Q9UDY2 1190 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 ADAM21Q9UKJ8 722 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 MTUS1Q9ULD2 1270 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 BRCA2P51587 3418 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 TMEM191CA6NGB0 347 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 HSF2BPO75031 334 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 PAEPP09466 180 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 PRKCZQ05513 592 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 ZNF252P-AS1Q0IIN9 211 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 CYP1B1Q16678 543 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 DUPD1Q68J44 220 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 DNAJC24Q6P3W2 148 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 PIK3R5Q8WYR1 880 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 FAXDC2Q96IV6 333 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 ZMAT2Q96NC0 199 aaKnown RBP17.66■□□□□ 0.42
FAM49B-223ENST00000522746 ERP44Q9BS26 406 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 RAB17Q9H0T7 212 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 PCYOX1Q9UHG3 505 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 CEP83Q9Y592 693 aa17.66■□□□□ 0.42
FAM49B-223ENST00000522746 FAM187AA6NFU0 413 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 FSCN2O14926 492 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 GJC1P36383 396 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 SSR1P43307 286 aaKnown RBP17.65■□□□□ 0.42
FAM49B-223ENST00000522746 RBP5P82980 135 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 CDC42EP1Q00587 391 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 PTPN11Q06124 597 aaPredicted RBP17.65■□□□□ 0.42
FAM49B-223ENST00000522746 PTPN20Q4JDL3 420 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 ALS2CLQ60I27 953 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 RHOT1Q8IXI2 618 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 PLVAPQ9BX97 442 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 FAM114A2Q9NRY5 505 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 RNF19AQ9NV58 838 aa17.65■□□□□ 0.42
FAM49B-223ENST00000522746 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.65■□□□□ 0.42
FAM49B-223ENST00000522746 MED7O43513 233 aa17.64■□□□□ 0.42
FAM49B-223ENST00000522746 TCF4P15884 667 aa17.64■□□□□ 0.42
FAM49B-223ENST00000522746 COILP38432 576 aaPredicted RBP17.64■□□□□ 0.42
FAM49B-223ENST00000522746 HSPA9P38646 679 aaKnown RBP17.64■□□□□ 0.42
FAM49B-223ENST00000522746 KCNJ1P48048 391 aa17.64■□□□□ 0.42
FAM49B-223ENST00000522746 FCGRTP55899 365 aa17.64■□□□□ 0.42
FAM49B-223ENST00000522746 OGDHQ02218 1023 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms