RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 ADAM28Q9UKQ2 775 aa8.83□□□□□ -1
PVT1-213ENST00000522414 GTF3C3Q9Y5Q9 886 aa8.83□□□□□ -1
PVT1-213ENST00000522414 ZMYM2Q9UBW7 1377 aa8.83□□□□□ -1
PVT1-213ENST00000522414 DOCK6Q96HP0 2047 aa8.82□□□□□ -1
PVT1-213ENST00000522414 PP2D1A8MPX8 630 aa8.82□□□□□ -1
PVT1-213ENST00000522414 PAX4O43316 350 aa8.82□□□□□ -1
PVT1-213ENST00000522414 RECQL4O94761 1208 aa8.82□□□□□ -1
PVT1-213ENST00000522414 KIF4AO95239 1232 aa8.82□□□□□ -1
PVT1-213ENST00000522414 MED26O95402 600 aa8.82□□□□□ -1
PVT1-213ENST00000522414 PRKCBP05771 671 aa8.82□□□□□ -1
PVT1-213ENST00000522414 THP07101 528 aa8.82□□□□□ -1
PVT1-213ENST00000522414 CD97P48960 835 aa8.82□□□□□ -1
PVT1-213ENST00000522414 GRIK3Q13003 919 aa8.82□□□□□ -1
PVT1-213ENST00000522414 GNL2Q13823 731 aaKnown RBP8.82□□□□□ -1
PVT1-213ENST00000522414 NAB2Q15742 525 aa8.82□□□□□ -1
PVT1-213ENST00000522414 ZBTB8OSQ8IWT0 167 aa8.82□□□□□ -1
PVT1-213ENST00000522414 SLC44A3Q8N4M1 653 aa8.82□□□□□ -1
PVT1-213ENST00000522414 FAM184AQ8NB25 1140 aa8.82□□□□□ -1
PVT1-213ENST00000522414 CMASQ8NFW8 434 aaPredicted RBP8.82□□□□□ -1
PVT1-213ENST00000522414 ERMNQ8TAM6 284 aa8.82□□□□□ -1
PVT1-213ENST00000522414 DEPTORQ8TB45 409 aa8.82□□□□□ -1
PVT1-213ENST00000522414 LNX1Q8TBB1 728 aaPredicted RBP8.82□□□□□ -1
PVT1-213ENST00000522414 PRIMPOLQ96LW4 560 aa8.82□□□□□ -1
PVT1-213ENST00000522414 RPP25Q9BUL9 199 aaKnown RBP8.82□□□□□ -1
PVT1-213ENST00000522414 CCDC113Q9H0I3 377 aa8.82□□□□□ -1
PVT1-213ENST00000522414 MFSD1Q9H3U5 465 aa8.82□□□□□ -1
PVT1-213ENST00000522414 FRRS1LQ9P0K9 344 aa8.82□□□□□ -1
PVT1-213ENST00000522414 LRWD1Q9UFC0 647 aa8.82□□□□□ -1
PVT1-213ENST00000522414 PCDHB6Q9Y5E3 794 aa8.82□□□□□ -1
PVT1-213ENST00000522414 KMT2EQ8IZD2 1858 aa8.82□□□□□ -1
PVT1-213ENST00000522414 FRYLO94915 3013 aa8.82□□□□□ -1
PVT1-213ENST00000522414 ZNF292O60281 2723 aa8.82□□□□□ -1
PVT1-213ENST00000522414 CCDC169A6NNP5 214 aa8.81□□□□□ -1
PVT1-213ENST00000522414 E9PMD0 336 aa8.81□□□□□ -1
PVT1-213ENST00000522414 I3L4J1 428 aa8.81□□□□□ -1
PVT1-213ENST00000522414 K7ERI5 159 aa8.81□□□□□ -1
PVT1-213ENST00000522414 N4BP3O15049 544 aa8.81□□□□□ -1
PVT1-213ENST00000522414 EIF5BO60841 1220 aaKnown RBP8.81□□□□□ -1
PVT1-213ENST00000522414 ALX3O95076 343 aa8.81□□□□□ -1
PVT1-213ENST00000522414 PAPLNO95428 1278 aa8.81□□□□□ -1
PVT1-213ENST00000522414 LAMP2P13473 410 aa8.81□□□□□ -1
PVT1-213ENST00000522414 NAMPTP43490 491 aa8.81□□□□□ -1
PVT1-213ENST00000522414 CLCN5P51795 746 aa8.81□□□□□ -1
PVT1-213ENST00000522414 PEX3P56589 373 aa8.81□□□□□ -1
PVT1-213ENST00000522414 OSTNP61366 133 aa8.81□□□□□ -1
PVT1-213ENST00000522414 NTHL1P78549 312 aa8.81□□□□□ -1
PVT1-213ENST00000522414 TUSC3Q13454 348 aa8.81□□□□□ -1
PVT1-213ENST00000522414 PDIA5Q14554 519 aa8.81□□□□□ -1
PVT1-213ENST00000522414 GLRA4Q5JXX5 417 aa8.81□□□□□ -1
PVT1-213ENST00000522414 CD300LGQ6UXG3 332 aa8.81□□□□□ -1
PVT1-213ENST00000522414 RSPO2Q6UXX9 243 aaPredicted RBP8.81□□□□□ -1
PVT1-213ENST00000522414 GRASPQ7Z6J2 395 aaPredicted RBP8.81□□□□□ -1
PVT1-213ENST00000522414 WFDC8Q8IUA0 241 aa8.81□□□□□ -1
PVT1-213ENST00000522414 SIX5Q8N196 739 aa8.81□□□□□ -1
PVT1-213ENST00000522414 HDAC7Q8WUI4 952 aa8.81□□□□□ -1
PVT1-213ENST00000522414 ZSCAN31Q96LW9 406 aaPredicted RBP8.81□□□□□ -1
PVT1-213ENST00000522414 TTPALQ9BTX7 342 aa8.81□□□□□ -1
PVT1-213ENST00000522414 C2orf40Q9H1Z8 148 aa8.81□□□□□ -1
PVT1-213ENST00000522414 PLEKHA4Q9H4M7 779 aa8.81□□□□□ -1
PVT1-213ENST00000522414 DDX19AQ9NUU7 478 aaKnown RBP8.81□□□□□ -1
PVT1-213ENST00000522414 FNIP2Q9P278 1114 aa8.81□□□□□ -1
PVT1-213ENST00000522414 FBXL21Q9UKT6 434 aa8.81□□□□□ -1
PVT1-213ENST00000522414 EP300Q09472 2414 aaPredicted RBP8.81□□□□□ -1
PVT1-213ENST00000522414 GVINP1Q7Z2Y8 2422 aa8.81□□□□□ -1
PVT1-213ENST00000522414 C2orf16Q68DN1 1984 aa8.81□□□□□ -1
PVT1-213ENST00000522414 B3GAT3O94766 335 aa8.8□□□□□ -1
PVT1-213ENST00000522414 U2AF2P26368 475 aaKnown RBP eCLIP8.8□□□□□ -13e-9■■■■■ 45.6
PVT1-213ENST00000522414 OR1D2P34982 312 aa8.8□□□□□ -1
PVT1-213ENST00000522414 NPTX2P47972 431 aa8.8□□□□□ -1
PVT1-213ENST00000522414 CLCNKBP51801 687 aa8.8□□□□□ -1
PVT1-213ENST00000522414 ORC2Q13416 577 aaPredicted RBP8.8□□□□□ -1
PVT1-213ENST00000522414 ZRSR1Q15695 479 aaKnown RBP8.8□□□□□ -1
PVT1-213ENST00000522414 ATF7IP2Q5U623 682 aa8.8□□□□□ -1
PVT1-213ENST00000522414 CWF19L1Q69YN2 538 aaKnown RBP8.8□□□□□ -1
PVT1-213ENST00000522414 DCLRE1AQ6PJP8 1040 aa8.8□□□□□ -1
PVT1-213ENST00000522414 KCNK18Q7Z418 384 aa8.8□□□□□ -1
PVT1-213ENST00000522414 DAW1Q8N136 415 aa8.8□□□□□ -1
PVT1-213ENST00000522414 CEP120Q8N960 986 aa8.8□□□□□ -1
PVT1-213ENST00000522414 IGSF22Q8N9C0 903 aa8.8□□□□□ -1
PVT1-213ENST00000522414 IFT74Q96LB3 600 aa8.8□□□□□ -1
PVT1-213ENST00000522414 PLIN2Q99541 437 aa8.8□□□□□ -1
PVT1-213ENST00000522414 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.8□□□□□ -1
PVT1-213ENST00000522414 IGSF9Q9P2J2 1179 aa8.8□□□□□ -1
PVT1-213ENST00000522414 EPS15L1Q9UBC2 864 aa8.8□□□□□ -1
PVT1-213ENST00000522414 DPP7Q9UHL4 492 aa8.8□□□□□ -1
PVT1-213ENST00000522414 CA14Q9ULX7 337 aa8.8□□□□□ -1
PVT1-213ENST00000522414 DNM3Q9UQ16 869 aa8.8□□□□□ -1
PVT1-213ENST00000522414 PLXNA3P51805 1871 aa8.8□□□□□ -1
PVT1-213ENST00000522414 TDRD15B5MCY1 1934 aaKnown RBP8.8□□□□□ -1
PVT1-213ENST00000522414 CLUHO75153 1309 aa8.8□□□□□ -1
PVT1-213ENST00000522414 SF3B1O75533 1304 aaKnown RBP eCLIP8.8□□□□□ -1
PVT1-213ENST00000522414 FAM186AA6NE01 2351 aa8.79□□□□□ -1
PVT1-213ENST00000522414 SMIM28A0A1B0GU29 152 aa8.79□□□□□ -1
PVT1-213ENST00000522414 CCL16O15467 120 aa8.79□□□□□ -1
PVT1-213ENST00000522414 HIP1RO75146 1068 aa8.79□□□□□ -1
PVT1-213ENST00000522414 MAP3K6O95382 1288 aa8.79□□□□□ -1
PVT1-213ENST00000522414 BRCC3P46736 316 aa8.79□□□□□ -1
PVT1-213ENST00000522414 TRAPPC10P48553 1259 aa8.79□□□□□ -1
PVT1-213ENST00000522414 ATP1A2P50993 1020 aa8.79□□□□□ -1
PVT1-213ENST00000522414 EFNA5P52803 228 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms