RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 NAPEPLDQ6IQ20 393 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 RNF168Q8IYW5 571 aaPredicted RBP17■□□□□ 0.31
PCDHA3-201ENST00000522353 ATXN7L3BQ96GX2 97 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17■□□□□ 0.31
PCDHA3-201ENST00000522353 TRPM5Q9NZQ8 1165 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 KANSL3Q9P2N6 904 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 DDTLA6NHG4 134 aaPredicted RBP17■□□□□ 0.31
PCDHA3-201ENST00000522353 TMEM253P0C7T8 217 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 DSG3P32926 999 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 ZNF280DQ6N043 979 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 GRAMD1AQ96CP6 724 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 PDCD2LQ9BRP1 358 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 MTG1Q9BT17 334 aaPredicted RBP17■□□□□ 0.31
PCDHA3-201ENST00000522353 OSBPL8Q9BZF1 889 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 PKP3Q9Y446 797 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 IPPQ9Y573 584 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 PIK3C2BO00750 1634 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 SERPIND1P05546 499 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 EPHB2P29323 1055 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 PEX19P40855 299 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 CUL2Q13617 745 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 POLD3Q15054 466 aaPredicted RBP17■□□□□ 0.31
PCDHA3-201ENST00000522353 ST13P4Q8IZP2 240 aaPredicted RBP17■□□□□ 0.31
PCDHA3-201ENST00000522353 SPATA4Q8NEY3 305 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 FBXO32Q969P5 355 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 THOC1Q96FV9 657 aaKnown RBP17■□□□□ 0.31
PCDHA3-201ENST00000522353 PXMP2Q9NR77 195 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 VPS9D1Q9Y2B5 631 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 MRFAP1Q9Y605 127 aa17■□□□□ 0.31
PCDHA3-201ENST00000522353 ZC3H11AO75152 810 aaKnown RBP eCLIP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 SPAG6O75602 509 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 ITIH2P19823 946 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 SMAD1Q15797 465 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 CTXN3Q4LDR2 81 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 TRIML2Q8N7C3 387 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 ATP6V1G3Q96LB4 118 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 DDIT4Q9NX09 232 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 HDAC6Q9UBN7 1215 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 ABCE1P61221 599 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 RABGAP1LQ5R372 815 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 USP50Q70EL3 339 aaPredicted RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 OOSP2Q86WS3 158 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 SHCBP1Q8NEM2 672 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 FEZF2Q8TBJ5 459 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 SPATA18Q8TC71 538 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 RPRD1AQ96P16 312 aaPredicted RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 EIF2AQ9BY44 585 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 PPCSQ9HAB8 311 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 CHCHD3Q9NX63 227 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 PHF2O75151 1096 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 AKR1A1P14550 325 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 FGFR2P21802 821 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 RAB27AP51159 221 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 BYSLQ13895 437 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 PAN2Q504Q3 1202 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 HIPK4Q8NE63 616 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 SNX12Q9UMY4 172 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 FAM205AQ6ZU69 1335 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 CCDC22O60826 627 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 SUPT3HO75486 399 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 ATP1A1P05023 1023 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 PCSK7Q16549 785 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 BEND6Q5SZJ8 279 aaPredicted RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 TGS1Q96RS0 853 aaKnown RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 MYCBPQ99417 103 aaPredicted RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 CINPQ9BW66 212 aaPredicted RBP16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 SALL1Q9NSC2 1324 aa16.99■□□□□ 0.31
PCDHA3-201ENST00000522353 SYNDIG1LA6NDD5 238 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 ATP6V1E1P36543 226 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 OAZ1P54368 228 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 EIF2B5Q13144 721 aaKnown RBP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 USP10Q14694 798 aaKnown RBP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 USP49Q70CQ1 688 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 TMC7Q7Z402 723 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 ABHD16BQ9H3Z7 469 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 WDCPQ9H6R7 721 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 F5H5T6 163 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 SYTL5Q8TDW5 730 aaPredicted RBP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 L3MBTL3Q96JM7 780 aaPredicted RBP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 STOML1Q9UBI4 398 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 CYB561D2O14569 222 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 RNASEH1O60930 286 aaKnown RBP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 RBP3P10745 1247 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 MBL2P11226 248 aaPredicted RBP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 VDRP11473 427 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 BRD2P25440 801 aaKnown RBP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 FMR1Q06787 632 aaKnown RBP eCLIP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 TAF2Q6P1X5 1199 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 PI4K2AQ9BTU6 479 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 RIMBP3CA6NJZ7 1639 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 RIMBP3BA6NNM3 1639 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 RIMBP3Q9UFD9 1639 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 TTLL13PA6NNM8 815 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 SLC37A4O43826 429 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 ANXA9O76027 345 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 FDPSP14324 419 aaKnown RBP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 SPRP35270 261 aaPredicted RBP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 LHX1P48742 406 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 PTK6Q13882 451 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 KLHDC7AQ5VTJ3 777 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms