RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 ATP8B2P98198 1209 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 KIF5AQ12840 1032 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 IFT88Q13099 833 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 SNX1Q13596 522 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 ITIH4Q14624 930 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 NECTIN1Q15223 517 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 CCDC92Q53HC0 331 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 ZNF569Q5MCW4 686 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 GKAP1Q5VSY0 366 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 PAPD7Q5XG87 772 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 ZNF530Q6P9A1 599 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 LRIG3Q6UXM1 1119 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 SAMD3Q8N6K7 520 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 ANKS4BQ8N8V4 417 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 TRIML1Q8N9V2 468 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 IRGQQ8WZA9 623 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 MAML3Q96JK9 1138 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 CTAGE1Q96RT6 745 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 ELF4Q99607 663 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 GOLPH3LQ9H4A5 285 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 EPB41L1Q9H4G0 881 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 MIS18AQ9NYP9 233 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 ACSL6Q9UKU0 697 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 SLC5A6Q9Y289 635 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 SIT1Q9Y3P8 196 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 ITIH6Q6UXX5 1313 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 CEP350Q5VT06 3117 aa7.16□□□□□ -1.26
CTNNA1-225ENST00000520865 PKD1L3Q7Z443 1732 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 ITGB4P16144 1822 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 FAM237AA0A1B0GTK4 181 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 SLC12A8A0AV02 714 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 IFIT3O14879 490 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 GSTA4O15217 222 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 TSPAN6O43657 245 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 PSPNO60542 156 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 TMCC1O94876 653 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 SCGB1D2O95969 90 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 RPSAP08865 295 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 SPINK2P20155 84 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 CMA1P23946 247 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 RPL13P26373 211 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 GRIK1P39086 918 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 EPHB1P54762 984 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 TGFB2P61812 414 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 MXRA7P84157 204 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 IRF9Q00978 393 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 MYO1EQ12965 1108 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 BIRC3Q13489 604 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 POSTNQ15063 836 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 E2F5Q15329 346 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 DPCR1Q3MIW9 517 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 CFAP58Q5T655 872 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 BROXQ5VW32 411 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 IQSEC1Q6DN90 963 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 BLOC1S2Q6QNY1 142 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 SEPT14Q6ZU15 432 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 RIOX2Q8IUF8 465 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 EXOC8Q8IYI6 725 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 LZTR1Q8N653 840 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 EFHBQ8N7U6 833 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 CCDC63Q8NA47 563 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 MLKLQ8NB16 471 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 ACRBPQ8NEB7 543 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 SMCR8Q8TEV9 937 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 TEKT4Q8WW24 435 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 MAIP1Q8WWC4 291 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 RSPH1Q8WYR4 309 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 SLC5A5Q92911 643 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 GFM2Q969S9 779 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 TEKT1Q969V4 418 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 CENPTQ96BT3 561 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 OPTNQ96CV9 577 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 SHISA4Q96DD7 197 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 CYFIP2Q96F07 1278 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 IFT74Q96LB3 600 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 POLR3CQ9BUI4 534 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 NUP58Q9BVL2 599 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 BOCQ9BWV1 1114 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 YIPF3Q9GZM5 350 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 MIS12Q9H081 205 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 UNC45AQ9H3U1 944 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 HAUS4Q9H6D7 363 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 NRDE2Q9H7Z3 1164 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 RXFP1Q9HBX9 757 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 SLC6A20Q9NP91 592 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 PAK6Q9NQU5 681 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 RNF14Q9UBS8 474 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 RPL26L1Q9UNX3 145 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 SRPK3Q9UPE1 567 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 ZNF148Q9UQR1 794 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 ZNF510Q9Y2H8 683 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 LRRC42Q9Y546 428 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 SAR1BQ9Y6B6 198 aa7.15□□□□□ -1.26
CTNNA1-225ENST00000520865 NCAPD2Q15021 1401 aa7.15□□□□□ -1.27
CTNNA1-225ENST00000520865 PXDNLA1KZ92 1463 aa7.15□□□□□ -1.27
CTNNA1-225ENST00000520865 CICQ96RK0 1608 aaPredicted RBP7.15□□□□□ -1.27
CTNNA1-225ENST00000520865 UBR3Q6ZT12 1888 aa7.15□□□□□ -1.27
CTNNA1-225ENST00000520865 ERVV-2B6SEH9 535 aa7.14□□□□□ -1.27
CTNNA1-225ENST00000520865 CHL1O00533 1208 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms