RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 CPA5Q8WXQ8 436 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 KRT35Q92764 455 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 ZIM3Q96PE6 472 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 MTMR12Q9C0I1 747 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 KATNBL1Q9H079 304 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 CDT1Q9H211 546 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 RNPEPQ9H4A4 650 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 ACP6Q9NPH0 428 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPARC-202ENST00000520687 PDGFCQ9NRA1 345 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 CISHQ9NSE2 258 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 CWC15Q9P013 229 aaKnown RBP10.57□□□□□ -0.72
SPARC-202ENST00000520687 WDR35Q9P2L0 1181 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 C2CD2Q9Y426 696 aa10.57□□□□□ -0.72
SPARC-202ENST00000520687 ZNF236Q9UL36 1845 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 ESYT3A0FGR9 886 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 SRRM3A6NNA2 597 aaPredicted RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 H3BRB1 525 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 DAPK3O43293 454 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 PPFIA2O75334 1257 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 FAM153BP0C7A2 387 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 ECHS1P30084 290 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 ACTN2P35609 894 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 COILP38432 576 aaPredicted RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 TNFSF9P41273 254 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 PTGIRP43119 386 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 GUCY2FP51841 1108 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 SKOR1P84550 965 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 CAP1Q01518 475 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 ZNF211Q13398 564 aaPredicted RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 PIGHQ14442 188 aaPredicted RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 SLMAPQ14BN4 828 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 DCAF4L1Q3SXM0 396 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 FAM153CQ494X1 144 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 ZNF667Q5HYK9 610 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 TJAP1Q5JTD0 557 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 SPOPLQ6IQ16 392 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 MTHFD1LQ6UB35 978 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 RCOR2Q8IZ40 523 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 TSEN2Q8NCE0 465 aaKnown RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 BBOF1Q8ND07 529 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 AFG1LQ8WV93 481 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 BRI3BPQ8WY22 251 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 COPS5Q92905 334 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 GDAP1L1Q96MZ0 367 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 FMO2Q99518 471 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 ADPGKQ9BRR6 497 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 TINF2Q9BSI4 451 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 C16orf70Q9BSU1 422 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 BCO2Q9BYV7 579 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 DNAI2Q9GZS0 605 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 XYLT2Q9H1B5 865 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 TUT1Q9H6E5 874 aaKnown RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 PLEKHA5Q9HAU0 1116 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 IFT122Q9HBG6 1241 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 FAM153AQ9UHL3 310 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 MROH7Q68CQ1 1323 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 MCM3APO60318 1980 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 TMEM191CA6NGB0 347 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 ZSCAN5CA6NGD5 496 aaPredicted RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 SHOX2O60902 331 aaPredicted RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 ECEL1O95672 775 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 SNAI1O95863 264 aaPredicted RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 GAS8O95995 478 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 CST3P01034 146 aaPredicted RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 WEE2P0C1S8 567 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 LMAN1P49257 510 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 CLCN3P51790 818 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 GSCP56915 257 aaPredicted RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 IRX5P78411 483 aaPredicted RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 MRPS25P82663 173 aaKnown RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 ACVR2BQ13705 512 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 MTFR1Q15390 333 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 STILQ15468 1287 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 PTPROQ16827 1216 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 CCDC137Q6PK04 289 aaKnown RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 GPR142Q7Z601 462 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 THNSL1Q8IYQ7 743 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 NIPA2Q8N8Q9 360 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 CCHCR1Q8TD31 782 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 RBM41Q96IZ5 413 aaKnown RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 MAML3Q96JK9 1138 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 DDX56Q9NY93 547 aaKnown RBP10.56□□□□□ -0.72
SPARC-202ENST00000520687 WHRNQ9P202 907 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 ITGA11Q9UKX5 1188 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 AKT3Q9Y243 479 aa10.56□□□□□ -0.72
SPARC-202ENST00000520687 A0A1B0GUA9 196 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 TTLL13PA6NNM8 815 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 TLR3O15455 904 aaKnown RBP10.55□□□□□ -0.72
SPARC-202ENST00000520687 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
SPARC-202ENST00000520687 MYZAPP0CAP1 466 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 STAG3L1P0CL83 205 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 RARAP10276 462 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 ITIH2P19823 946 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 AXLP30530 894 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 PTPN7P35236 360 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 HSD17B3P37058 310 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 CDR1P51861 262 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 SNX16P57768 344 aa10.55□□□□□ -0.72
SPARC-202ENST00000520687 RBP5P82980 135 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms