RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ZNF302Q9NR11 478 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 MTRRQ9UBK8 725 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 MAFBQ9Y5Q3 323 aaPredicted RBP7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 CDY1Q9Y6F8 540 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 CSMD2Q7Z408 3487 aa7.61□□□□□ -1.19
CTNNA1-216ENST00000519489 PALM3A6NDB9 673 aaPredicted RBP7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 ZNF197O14709 1029 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 ZNF213O14771 459 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 SMARCA5O60264 1052 aaPredicted RBP7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 TADA2AO75478 443 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 FGAP02671 866 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 RNF224P0DH78 156 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 RLBP1P12271 317 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 ARSAP15289 507 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 TMPRSS3P57727 454 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 SPIRE1Q08AE8 756 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 TARDBPQ13148 414 aaKnown RBP eCLIP7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 TBC1D25Q3MII6 688 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 ARHGAP29Q52LW3 1261 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 SFTPA1Q8IWL2 248 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 USP33Q8TEY7 942 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 PIBF1Q8WXW3 757 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 HIC2Q96JB3 615 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 SCLT1Q96NL6 688 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 KIF2CQ99661 725 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 GCOM2Q9BZD3 368 aaPredicted RBP7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 SMG9Q9H0W8 520 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 GKN1Q9NS71 199 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 AGPAT5Q9NUQ2 364 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 GMIPQ9P107 970 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 TBX20Q9UMR3 447 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 MAP4K5Q9Y4K4 846 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 IPPQ9Y573 584 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 PTPRDP23468 1912 aa7.6□□□□□ -1.19
CTNNA1-216ENST00000519489 A0A1W2PRU2 124 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 PIK3CDO00329 1044 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 MAGEB2O15479 319 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 ABLIM3O94929 683 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 ZFYP08048 801 aaPredicted RBP7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 FGFR3P22607 806 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 COL8A1P27658 744 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 ROR1Q01973 937 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 SCRN1Q12765 414 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 HSP90AA2PQ14568 343 aaPredicted RBP7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 ALX1Q15699 326 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 UBE2SQ16763 222 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 RTL10Q7L3V2 364 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 CATSPER4Q7RTX7 472 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 TMPRSS12Q86WS5 348 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 TTC30AQ86WT1 665 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 SRRM1Q8IYB3 904 aaKnown RBP7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 FAM26EQ8N5C1 309 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 CCDC33Q8N5R6 958 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 SMARCC2Q8TAQ2 1214 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 RHBDD1Q8TEB9 315 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 PNMA5Q96PV4 448 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 MXRA8Q9BRK3 442 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 EBF3Q9H4W6 596 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 KAT14Q9H8E8 782 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 IFT122Q9HBG6 1241 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 INSL5Q9Y5Q6 135 aa7.59□□□□□ -1.19
CTNNA1-216ENST00000519489 SF3B1O75533 1304 aaKnown RBP eCLIP7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 PNMA6FA0A0J9YX94 578 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 ANO9A1A5B4 782 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 TMEM150BA6NC51 233 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 CASTOR2A6NHX0 329 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 H3BM21 787 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 MAFGO15525 162 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 LRG1P02750 347 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 SYPP08247 313 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 ITGA4P13612 1032 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 DRD1P21728 446 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 SFPQP23246 707 aaKnown RBP eCLIP7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 MAOBP27338 520 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 GRM5P41594 1212 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 ZNF33AQ06730 810 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 VAC14Q08AM6 782 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 MESP2Q0VG99 397 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 ARID5BQ14865 1188 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 NAB2Q15742 525 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 CRY1Q16526 586 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 SPDYCQ5MJ68 293 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 CYP4A22Q5TCH4 519 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 FAM160B1Q5W0V3 765 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 CKAP2LQ8IYA6 745 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 TCEAL8Q8IYN2 117 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 FRAT1Q92837 279 aaPredicted RBP7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 E2F7Q96AV8 911 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 LGMNQ99538 433 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 P2RY13Q9BPV8 354 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 SH2D3AQ9BRG2 576 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 NRSN2Q9GZP1 204 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 SLITRK6Q9H5Y7 841 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 LRRC4CQ9HCJ2 640 aa7.58□□□□□ -1.2
CTNNA1-216ENST00000519489 ESYT2A0FGR8 921 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 I3L4J1 428 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 K7EQS6 105 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 CBX4O00257 560 aa7.57□□□□□ -1.2
CTNNA1-216ENST00000519489 CILPO75339 1184 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms