RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CYP3A43	Q9HB55	503 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SPC25	Q9HBM1	224 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	XPNPEP3	Q9NQH7	507 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	AVEN	Q9NQS1	362 aa	Predicted RBP	4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CISH	Q9NSE2	258 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	DPP3	Q9NY33	737 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SNTG2	Q9NY99	539 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CTTNBP2NL	Q9P2B4	639 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	UVRAG	Q9P2Y5	699 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SRRD	Q9UH36	339 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GTF2IRD1	Q9UHL9	959 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	AMFR	Q9UKV5	643 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ITGA11	Q9UKX5	1188 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	RAB21	Q9UL25	225 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PCDHGC3	Q9UN70	934 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	POLI	Q9UNA4	740 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ALG6	Q9Y672	507 aa		4.79	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MGAM	O43451	1857 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TARSL2	A2RTX5	802 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MIF4GD	A9UHW6	222 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	KCNK3	O14649	394 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SPTLC1	O15269	473 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	THAP12	O43422	761 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	LSM8	O95777	96 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GNRH1	P01148	92 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	HMGCR	P04035	888 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	RPLP2	P05387	115 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ASGR1	P07306	291 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	KRT19	P08727	400 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PAEP	P09466	180 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	WEE2	P0C1S8	567 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	RHOXF2B	P0C7M4	288 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	KCNE1	P15382	129 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ELN	P15502	786 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CD58	P19256	250 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	DNAJB2	P25686	324 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	HOXD10	P28358	340 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CCND3	P30281	292 aa	Predicted RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	POLR2B	P30876	1174 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CDH5	P33151	784 aa	Predicted RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MAP2K2	P36507	400 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NSF	P46459	744 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	APLP1	P51693	650 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	YARS	P54577	528 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	RAD23B	P54727	409 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MRPS6	P82932	125 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PTPN11	Q06124	597 aa	Predicted RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MGAT3	Q09327	533 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PTP4A2	Q12974	167 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	BRD3	Q15059	726 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	KCNA10	Q16322	511 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	WDR72	Q3MJ13	1102 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TMEM259	Q4ZIN3	620 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GLE1	Q53GS7	698 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CCDC181	Q5TID7	509 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NAA35	Q5VZE5	725 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GDF6	Q6KF10	455 aa	Predicted RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	WDR93	Q6P2C0	686 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CXCL17	Q6UXB2	119 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MON1B	Q7L1V2	547 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	RSPH3	Q86UC2	560 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SERINC5	Q86VE9	423 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	FAM228A	Q86W67	206 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TMEM130	Q8N3G9	435 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TTC39C	Q8N584	583 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	WDTC1	Q8N5D0	677 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	USP38	Q8NB14	1042 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ZNF564	Q8TBZ8	553 aa	Predicted RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ACTRT1	Q8TDG2	376 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	WHAMM	Q8TF30	809 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CPA5	Q8WXQ8	436 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	HPDL	Q96IR7	371 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MS4A14	Q96JA4	679 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SNX27	Q96L92	541 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ZMAT2	Q96NC0	199 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PNKP	Q96T60	521 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PSMB7	Q99436	277 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	RHOXF2	Q9BQY4	288 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SELENOO	Q9BVL4	669 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NUP85	Q9BW27	656 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ZNF518B	Q9C0D4	1074 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SDCBP2	Q9H190	292 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CXCL16	Q9H2A7	254 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	LHX5	Q9H2C1	402 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PDCL3	Q9H2J4	239 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GOLPH3	Q9H4A6	298 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	EHD2	Q9NZN4	543 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CNTN3	Q9P232	1028 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NXF1	Q9UBU9	619 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CNOT8	Q9UFF9	292 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TMEM59L	Q9UK28	342 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	AGAP1	Q9UPQ3	857 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GINS2	Q9Y248	185 aa		4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NOC2L	Q9Y3T9	749 aa	Known RBP	4.78	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TRPV2	Q9Y5S1	764 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms