RNA–Protein interactions for RNA: ENST00000515564.5

GATB-212, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 2

Gene GATB, Length 6,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-212ENST00000515564 VMP1Q96GC9 406 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 TUT1Q9H6E5 874 aaKnown RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 RUBCNLQ9H714 662 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 ZFATQ9P243 1243 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 PPARGC1AQ9UBK2 798 aaKnown RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 APEX2Q9UBZ4 518 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 SPACA6W5XKT8 324 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 PDS5AQ29RF7 1337 aaKnown RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 PNPLA6Q8IY17 1366 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 FAM47E-STBD1D6RA91 191 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 CCDC188H7C350 402 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 UBXN8O00124 270 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 BEX3Q00994 111 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 CEP68Q76N32 757 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 DHX40Q8IX18 779 aaKnown RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 PPP1R2P1Q96PQ5 205 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 HPS4Q9NQG7 708 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 ABHD10Q9NUJ1 306 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 DDIT4Q9NX09 232 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 NFU1Q9UMS0 254 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 A0A087WUV0 522 aaPredicted RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 DSG3P32926 999 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 SLC1A1P43005 524 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 RFX3P48380 749 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 NDUFV1P49821 464 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 RAB27AP51159 221 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 OXCT1P55809 520 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 ERVK-9P63128 1117 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 ERVK-24P63145 666 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 ZNF284Q2VY69 593 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 EPM2AIP1Q7L775 607 aaPredicted RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 CACUL1Q86Y37 369 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 ANKMY2Q8IV38 441 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 HIPK4Q8NE63 616 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 PPP1R36Q96LQ0 422 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 MRPL9Q9BYD2 267 aaKnown RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 NIF3L1Q9GZT8 377 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 NMRK2Q9NPI5 230 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 DBR1Q9UK59 544 aaKnown RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 FNDC3BQ53EP0 1204 aaKnown RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 MYRIPQ8NFW9 859 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 USP13Q92995 863 aaPredicted RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 SNF8Q96H20 258 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 P2RX7Q99572 595 aaKnown RBP8.72□□□□□ -1.01
GATB-212ENST00000515564 PHF20Q9BVI0 1012 aa8.72□□□□□ -1.01
GATB-212ENST00000515564 PSEN2P49810 448 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 CCL23P55773 120 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 PIGHQ14442 188 aaPredicted RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 SGO1Q5FBB7 561 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 E4F1Q66K89 784 aaPredicted RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 MPZL3Q6UWV2 235 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 CD302Q8IX05 232 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 ZFYVE19Q96K21 471 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 CCDC3Q9BQI4 270 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 RASSF4Q9H2L5 321 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 COPS7BQ9H9Q2 264 aaPredicted RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.71□□□□□ -1.01
GATB-212ENST00000515564 CAPN11Q9UMQ6 739 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 ARHGAP26Q9UNA1 814 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 CDC42BPAQ5VT25 1732 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 A0A087WZ62 844 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 MSCO60682 206 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 RHOCP08134 193 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 DARSP14868 501 aaKnown RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 FMO5P49326 533 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 EIF3BP55884 814 aaKnown RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 NCALDP61601 193 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 PPATQ06203 517 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 CUL4AQ13619 759 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 PDK1Q15118 436 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 P3H1Q32P28 736 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 MDH1BQ5I0G3 518 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 KRT80Q6KB66 452 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 MTHFD1LQ6UB35 978 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 NAF1Q96HR8 494 aaKnown RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 FDXACB1Q9BRP7 624 aaPredicted RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 GOLPH3LQ9H4A5 285 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 CNOT10Q9H9A5 744 aaKnown RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 XAB2Q9HCS7 855 aaKnown RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 TLR8Q9NR97 1041 aaKnown RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 TBX20Q9UMR3 447 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 ADGRA2Q96PE1 1338 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 STX7O15400 261 aaKnown RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 SPAG7O75391 227 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 APRTP07741 180 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 PYGBP11216 843 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 EPHB2P29323 1055 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 IZUMO3Q5VZ72 239 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 ACOT1Q86TX2 421 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 ZNF512BQ96KM6 892 aaPredicted RBP8.71□□□□□ -1.01
GATB-212ENST00000515564 SYTL2Q9HCH5 934 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 TMEM8AQ9HCN3 771 aa8.71□□□□□ -1.01
GATB-212ENST00000515564 WNT10BO00744 389 aa8.71□□□□□ -1.02
GATB-212ENST00000515564 FGFR4P22455 802 aa8.71□□□□□ -1.02
GATB-212ENST00000515564 LHX1P48742 406 aa8.71□□□□□ -1.02
GATB-212ENST00000515564 TP53BP2Q13625 1128 aa8.71□□□□□ -1.02
GATB-212ENST00000515564 PNMA5Q96PV4 448 aa8.71□□□□□ -1.02
GATB-212ENST00000515564 PNKPQ96T60 521 aa8.71□□□□□ -1.02
GATB-212ENST00000515564 TMEM117Q9H0C3 514 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms