RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 SLC2A3P11169 496 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 CDH18Q13634 790 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 MRPS31Q92665 395 aaKnown RBP16.77■□□□□ 0.28
TRIM41-207ENST00000515223 GPRASP2Q96D09 838 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 FAM49BQ9NUQ9 324 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 HPSEQ9Y251 543 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 PDHBP11177 359 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 PDK1Q15118 436 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 SYDE1Q6ZW31 735 aaPredicted RBP16.77■□□□□ 0.28
TRIM41-207ENST00000515223 APRTP07741 180 aa16.77■□□□□ 0.27
TRIM41-207ENST00000515223 HNRNPH1P31943 449 aaKnown RBP16.77■□□□□ 0.27
TRIM41-207ENST00000515223 SLC11A2P49281 568 aa16.77■□□□□ 0.27
TRIM41-207ENST00000515223 C9orf131Q5VYM1 1079 aa16.77■□□□□ 0.27
TRIM41-207ENST00000515223 PLA2G4FQ68DD2 849 aa16.77■□□□□ 0.27
TRIM41-207ENST00000515223 GIMAP4Q9NUV9 329 aa16.77■□□□□ 0.27
TRIM41-207ENST00000515223 L1RE1Q9UN81 338 aa16.77■□□□□ 0.27
TRIM41-207ENST00000515223 PIK3C2BO00750 1634 aa16.77■□□□□ 0.27
TRIM41-207ENST00000515223 RAD51CO43502 376 aa16.77■□□□□ 0.27
TRIM41-207ENST00000515223 C1orf146Q5VVC0 180 aa16.77■□□□□ 0.27
TRIM41-207ENST00000515223 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.27
TRIM41-207ENST00000515223 DDX42Q86XP3 938 aaKnown RBP eCLIP16.77■□□□□ 0.27
TRIM41-207ENST00000515223 CNTNAP4Q9C0A0 1308 aa16.77■□□□□ 0.27
TRIM41-207ENST00000515223 MTSS1O43312 755 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 HLA-DPA1P20036 260 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 MAP3K10Q02779 954 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 NBPF9Q3BBW0 867 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 ST13P4Q8IZP2 240 aaPredicted RBP16.76■□□□□ 0.27
TRIM41-207ENST00000515223 KRT87PA6NCN2 255 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 FMO5P49326 533 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 MMP14P50281 582 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 CLEC10AQ8IUN9 316 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 ATP6V0D2Q8N8Y2 350 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 ABI2Q9NYB9 513 aaPredicted RBP16.76■□□□□ 0.27
TRIM41-207ENST00000515223 IPPQ9Y573 584 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 CCDC22O60826 627 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 TRAPPC11Q7Z392 1133 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 USP13Q92995 863 aaPredicted RBP16.76■□□□□ 0.27
TRIM41-207ENST00000515223 GOLPH3Q9H4A6 298 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 GBA2Q9HCG7 927 aaPredicted RBP16.76■□□□□ 0.27
TRIM41-207ENST00000515223 ENTPD7Q9NQZ7 604 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 ZNF263O14978 683 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 DCAF6Q58WW2 860 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 FOXR1Q6PIV2 292 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 YME1L1Q96TA2 773 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 MROH8Q9H579 483 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 CD248Q9HCU0 757 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.76■□□□□ 0.27
TRIM41-207ENST00000515223 DCTN4Q9UJW0 460 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 FAM32AQ9Y421 112 aaKnown RBP16.76■□□□□ 0.27
TRIM41-207ENST00000515223 MYOM1P52179 1685 aa16.76■□□□□ 0.27
TRIM41-207ENST00000515223 EGFRP00533 1210 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 TCF7P36402 384 aaPredicted RBP16.75■□□□□ 0.27
TRIM41-207ENST00000515223 PPP3CCP48454 512 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 HS6ST3Q8IZP7 471 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 SHCBP1Q8NEM2 672 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 NIF3L1Q9GZT8 377 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 CXorf56Q9H5V9 222 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 RASA1P20936 1047 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 TOB1P50616 345 aaPredicted RBP16.75■□□□□ 0.27
TRIM41-207ENST00000515223 SEPT8Q92599 483 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 OTULINQ96BN8 352 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 HPDLQ96IR7 371 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 CLMNQ96JQ2 1002 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 ZNF512BQ96KM6 892 aaPredicted RBP16.75■□□□□ 0.27
TRIM41-207ENST00000515223 TGS1Q96RS0 853 aaKnown RBP16.75■□□□□ 0.27
TRIM41-207ENST00000515223 NSMCE4AQ9NXX6 385 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 H0Y626 953 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 HLA-DRAP01903 254 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 STAT4Q14765 748 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 CPA5Q8WXQ8 436 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 IL17RAQ96F46 866 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 CCDC90BQ9GZT6 254 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 RAB6BQ9NRW1 208 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 C6orf203Q9P0P8 240 aaPredicted RBP16.75■□□□□ 0.27
TRIM41-207ENST00000515223 PCDHB2Q9Y5E7 798 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 ANGPT2O15123 496 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 EXTL3O43909 919 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 RNASEH1O60930 286 aaKnown RBP16.75■□□□□ 0.27
TRIM41-207ENST00000515223 RHOBTB3O94955 611 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 AMPD2Q01433 879 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 ZBTB17Q13105 803 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 KIZQ2M2Z5 673 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.75■□□□□ 0.27
TRIM41-207ENST00000515223 ARHGEF26Q96DR7 871 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 AGBL1Q96MI9 1066 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 URODP06132 367 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 CHN1P15882 459 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 BLVRAP53004 296 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 OCA2Q04671 838 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 EZH2Q15910 746 aaKnown RBP16.75■□□□□ 0.27
TRIM41-207ENST00000515223 FRMPD1Q5SYB0 1578 aa16.75■□□□□ 0.27
TRIM41-207ENST00000515223 KIF20BQ96Q89 1820 aa16.74■□□□□ 0.27
TRIM41-207ENST00000515223 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.74■□□□□ 0.27
TRIM41-207ENST00000515223 EPHX2P34913 555 aa16.74■□□□□ 0.27
TRIM41-207ENST00000515223 RPS6P62753 249 aaKnown RBP16.74■□□□□ 0.27
TRIM41-207ENST00000515223 ZNF177Q13360 481 aaPredicted RBP16.74■□□□□ 0.27
TRIM41-207ENST00000515223 MKRN4PQ13434 485 aaPredicted RBP16.74■□□□□ 0.27
TRIM41-207ENST00000515223 PCSK7Q16549 785 aa16.74■□□□□ 0.27
TRIM41-207ENST00000515223 MCEEQ96PE7 176 aa16.74■□□□□ 0.27
TRIM41-207ENST00000515223 PKD2L2Q9NZM6 624 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms