RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 GYPEP15421 78 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 GNAT2P19087 354 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 ACO1P21399 889 aaKnown RBP5.29□□□□□ -1.56
CLDND1-228ENST00000513873 MCCP23508 829 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 SRSF2Q01130 221 aaKnown RBP5.29□□□□□ -1.56
CLDND1-228ENST00000513873 FOXL1Q12952 345 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 ACAP2Q15057 778 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 CCDC57Q2TAC2 916 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 PARP10Q53GL7 1025 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 C19orf54Q5BKX5 351 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 FKBP15Q5T1M5 1219 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 TICAM2Q86XR7 235 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 LYSMD2Q8IV50 215 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 PIK3C3Q8NEB9 887 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 SNX33Q8WV41 574 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 RUFY2Q8WXA3 655 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 FDXACB1Q9BRP7 624 aaPredicted RBP5.29□□□□□ -1.56
CLDND1-228ENST00000513873 TLR9Q9NR96 1032 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 CCM2LQ9NUG4 571 aaPredicted RBP5.29□□□□□ -1.56
CLDND1-228ENST00000513873 THSD7BQ9C0I4 1608 aa5.29□□□□□ -1.56
CLDND1-228ENST00000513873 C4AP0C0L4 1744 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 TTC41PQ6P2S7 1318 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 MAP3K15Q6ZN16 1313 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 ITGB4P16144 1822 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 EPB41L2O43491 1005 aaKnown RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 CA12O43570 354 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 KATNA1O75449 491 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 IPO13O94829 963 aaKnown RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 ANXA1P04083 346 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 A1BGP04217 495 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 NBPF7P0C2Y1 421 aaPredicted RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 CYP19A1P11511 503 aaPredicted RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 MX1P20591 662 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 HIBADHP31937 336 aaKnown RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 PER3P56645 1201 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 ERVK-21P61565 698 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 CRHR2Q13324 411 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 PROSER3Q2NL68 480 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 MBNL2Q5VZF2 373 aaKnown RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 CLEC4GQ6UXB4 293 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 SMIM5Q71RC9 77 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 PNMA8AQ86V59 439 aaPredicted RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 SLC41A1Q8IVJ1 513 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 DNAJC10Q8IXB1 793 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 CNTROBQ8N137 903 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 GLB1L3Q8NCI6 653 aaPredicted RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 GPR156Q8NFN8 814 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 CEP89Q96ST8 783 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 SCAND2PQ9GZW5 306 aaPredicted RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 PRDM12Q9H4Q4 367 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 GREM2Q9H772 168 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 AGO3Q9H9G7 860 aaKnown RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 SAP30BPQ9UHR5 308 aaKnown RBP5.28□□□□□ -1.56
CLDND1-228ENST00000513873 TRHDEQ9UKU6 1024 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 GPR45Q9Y5Y3 372 aa5.28□□□□□ -1.56
CLDND1-228ENST00000513873 SHTN1A0MZ66 631 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 KLHL33A6NCF5 533 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 C1QTNF3-AMACRE9PGA6 284 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 XPOTO43592 962 aaKnown RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 GASTP01350 101 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 PCCAP05165 728 aaPredicted RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 IGKV5-2P06315 115 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 OSMP13725 252 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 ZNF20P17024 532 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 CTSSP25774 331 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 IL15P40933 162 aaPredicted RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 CASRP41180 1078 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 PDE1AP54750 535 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 DUSP8Q13202 625 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 IFIT5Q13325 482 aaKnown RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 ELAVL1Q15717 326 aaKnown RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 RABL6Q3YEC7 729 aaPredicted RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 TTC22Q5TAA0 569 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 UBE3BQ7Z3V4 1068 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 PALM2Q8IXS6 379 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 ZNF480Q8WV37 535 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 RIN2Q8WYP3 895 aaPredicted RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 EDAQ92838 391 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 MIEF2Q96C03 454 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 IL17RAQ96F46 866 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 ZNF512Q96ME7 567 aaPredicted RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 UHRF1Q96T88 793 aaPredicted RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 ISCA1Q9BUE6 129 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 NYXQ9GZU5 481 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 BICC1Q9H694 974 aaKnown RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 CD248Q9HCU0 757 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 RBM12Q9NTZ6 932 aaKnown RBP5.27□□□□□ -1.57
CLDND1-228ENST00000513873 STAP2Q9UGK3 403 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 DNM3Q9UQ16 869 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 EXOC6BQ9Y2D4 811 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 SPEF1Q9Y4P9 236 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 ADAMTS7Q9UKP4 1686 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 PALLDQ8WX93 1383 aa5.27□□□□□ -1.57
CLDND1-228ENST00000513873 CDHR2Q9BYE9 1310 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 TRPM7Q96QT4 1865 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 PNMA6EA0A0J9YXQ4 647 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 ANKRD18BA2A2Z9 1011 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 CIAO1O76071 339 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 MT-CO1P00395 513 aa5.26□□□□□ -1.57
CLDND1-228ENST00000513873 GSPT1P15170 499 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms