RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 IFT122Q9HBG6 1241 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 ERVK-5Q9HDB9 667 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 PLAGL2Q9UPG8 496 aa13.23□□□□□ -0.29
LIN54-210ENST00000510877 A0A1W2PQ27 194 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 A0A1W2PQ64 194 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 A0A1W2PQD8 194 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 FAM170AA1A519 330 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 LYPLA2O95372 231 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 GALTP07902 379 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 LCP1P13796 627 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 EVCP57679 992 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 LRRC63Q05C16 580 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 CDH18Q13634 790 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 MDH1BQ5I0G3 518 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 KIAA1324Q6UXG2 1013 aaKnown RBP13.22□□□□□ -0.29
LIN54-210ENST00000510877 SMIM28A0A1B0GU29 152 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 NCOR1O75376 2440 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 CFHP08603 1231 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 SKILP12757 684 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 TWF1Q12792 350 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 HIC1Q14526 733 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 CCDC186Q7Z3E2 898 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 GRASPQ7Z6J2 395 aaPredicted RBP13.22□□□□□ -0.29
LIN54-210ENST00000510877 SELENOOQ9BVL4 669 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 LSM14BQ9BX40 385 aaKnown RBP13.22□□□□□ -0.29
LIN54-210ENST00000510877 AGXT2Q9BYV1 514 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 ELOVL4Q9GZR5 314 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 FAM207AQ9NSI2 230 aaPredicted RBP13.22□□□□□ -0.29
LIN54-210ENST00000510877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.22□□□□□ -0.296e-8■■□□□ 13.3
LIN54-210ENST00000510877 MYH13Q9UKX3 1938 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 STXBP5LQ9Y2K9 1186 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 PCDHA5Q9Y5H7 936 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 ADAMTS7Q9UKP4 1686 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 GAS8O95995 478 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 UBASH3AP57075 661 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 CBX2Q14781 532 aaPredicted RBP13.22□□□□□ -0.29
LIN54-210ENST00000510877 DENND5BQ6ZUT9 1274 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 TRIM9Q9C026 710 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 NRDE2Q9H7Z3 1164 aa13.22□□□□□ -0.29
LIN54-210ENST00000510877 CTDNEP1O95476 244 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 TRIM49P0CI25 452 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 TRIM49CP0CI26 452 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 CLNS1AP54105 237 aaKnown RBP13.21□□□□□ -0.29
LIN54-210ENST00000510877 CUL4BQ13620 913 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 RBBP5Q15291 538 aaKnown RBP13.21□□□□□ -0.29
LIN54-210ENST00000510877 ASIC2Q16515 512 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 JADE1Q6IE81 842 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 MIR1-1HGQ9H1L0 117 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 IGLV3-22A0A075B6J6 115 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
LIN54-210ENST00000510877 CCNE1P24864 410 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 CDK7P50613 346 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 KIF11P52732 1056 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 EPHB1P54762 984 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 MYL5Q02045 173 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 LRRC32Q14392 662 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 WSCD1Q658N2 575 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 TAB2Q9NYJ8 693 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 CA14Q9ULX7 337 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 NCKAP1Q9Y2A7 1128 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 PDXKO00764 312 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 TAP1Q03518 808 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 ZSCAN26Q16670 478 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 CCDC121Q6ZUS5 278 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 MAB21L3Q8N8X9 362 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 HAS1Q92839 578 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 KCNB2Q92953 911 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 GCNT4Q9P109 453 aa13.21□□□□□ -0.29
LIN54-210ENST00000510877 ATG13O75143 517 aa13.21□□□□□ -0.3
LIN54-210ENST00000510877 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.3
LIN54-210ENST00000510877 ZNF658Q5TYW1 1059 aaPredicted RBP13.21□□□□□ -0.3
LIN54-210ENST00000510877 TMEM35BQ8NCS4 154 aa13.21□□□□□ -0.3
LIN54-210ENST00000510877 CDK5RAP1Q96SZ6 601 aaKnown RBP13.21□□□□□ -0.3
LIN54-210ENST00000510877 ACO2Q99798 780 aaKnown RBP13.21□□□□□ -0.3
LIN54-210ENST00000510877 HSD17B14Q9BPX1 270 aa13.21□□□□□ -0.3
LIN54-210ENST00000510877 GTF3C4Q9UKN8 822 aa13.21□□□□□ -0.3
LIN54-210ENST00000510877 COL24A1Q17RW2 1714 aa13.21□□□□□ -0.3
LIN54-210ENST00000510877 NFATC1O95644 943 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 GUCY2FP51841 1108 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 DRP2Q13474 957 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 CUL4AQ13619 759 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 KRT81Q14533 505 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 CHSY1Q86X52 802 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 ERICH1Q86X53 443 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 SMYD4Q8IYR2 804 aaPredicted RBP13.2□□□□□ -0.3
LIN54-210ENST00000510877 CHPFQ8IZ52 775 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 GSDMBQ8TAX9 411 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 RCOR1Q9UKL0 485 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 LUC7L2Q9Y383 392 aaKnown RBP13.2□□□□□ -0.3
LIN54-210ENST00000510877 NFE2L3Q9Y4A8 694 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 ASTN1O14525 1302 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 TRIM66O15016 1216 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 DCXO43602 365 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 USP17L7P0C7H9 530 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 ERVK-21P61565 698 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 AOPEPQ8N6M6 819 aa13.2□□□□□ -0.3
LIN54-210ENST00000510877 TRIML1Q8N9V2 468 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms