RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 ZNF197O14709 1029 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 MYL4P12829 197 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 CD72P21854 359 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 GARTP22102 1010 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 ALDH1A3P47895 512 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 TAF6P49848 677 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 PRKCQQ04759 706 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 CSTF1Q05048 431 aaKnown RBP11.71□□□□□ -0.53
TUSC3-208ENST00000509177 DNM1Q05193 864 aaKnown RBP11.71□□□□□ -0.53
TUSC3-208ENST00000509177 TWF1Q12792 350 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 PLD1Q13393 1074 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 UBXN2BQ14CS0 331 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 MLF2Q15773 248 aaPredicted RBP11.71□□□□□ -0.53
TUSC3-208ENST00000509177 SLC44A4Q53GD3 710 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 CRELD2Q6UXH1 353 aaPredicted RBP11.71□□□□□ -0.53
TUSC3-208ENST00000509177 NT5DC4Q86YG4 428 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 THEM5Q8N1Q8 247 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 KXD1Q9BQD3 176 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 PYM1Q9BRP8 204 aaKnown RBP11.71□□□□□ -0.53
TUSC3-208ENST00000509177 BCO2Q9BYV7 579 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 TRIM9Q9C026 710 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 KBTBD4Q9NVX7 518 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 RBAKQ9NYW8 714 aaPredicted RBP11.71□□□□□ -0.53
TUSC3-208ENST00000509177 PCDHA7Q9UN72 937 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 PCDHGA2Q9Y5H1 932 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 CFAP47Q6ZTR5 3102 aa11.71□□□□□ -0.53
TUSC3-208ENST00000509177 ANO9A1A5B4 782 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 FAM170BA6NMN3 283 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 SPTLC1O15269 473 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 LAMTOR5O43504 91 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 EXTL3O43909 919 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 AFMP43652 599 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 ATXN1P54253 815 aaKnown RBP11.7□□□□□ -0.54
TUSC3-208ENST00000509177 EPHB3P54753 998 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 DUSP4Q13115 394 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 GPR17Q13304 367 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 PKP1Q13835 747 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 MYBPC2Q14324 1141 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 E2F4Q16254 413 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 TAF12Q16514 161 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 SV2CQ496J9 727 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 FAM26FQ5R3K3 315 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 BRSK2Q8IWQ3 736 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 NPAS3Q8IXF0 933 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 CEP57L1Q8IYX8 460 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 GPD1LQ8N335 351 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 CSGALNACT2Q8N6G5 542 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 ZBTB44Q8NCP5 570 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 ZSWIM2Q8NEG5 633 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 FAM200AQ8TCP9 573 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 ATRIPQ8WXE1 791 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 NELL1Q92832 810 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 HPS3Q969F9 1004 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 ZNF560Q96MR9 790 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 CBWD1Q9BRT8 395 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 FGFBP2Q9BYJ0 223 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 OSBPL6Q9BZF3 934 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 MAGEF1Q9HAY2 307 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 ASAH2Q9NR71 780 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 GDE1Q9NZC3 331 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 NCDNQ9UBB6 729 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 AGAP1Q9UPQ3 857 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 SLC27A5Q9Y2P5 690 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 NOTCH4Q99466 2003 aa11.7□□□□□ -0.54
TUSC3-208ENST00000509177 MAP1BP46821 2468 aaKnown RBP11.69□□□□□ -0.54
TUSC3-208ENST00000509177 KIAA0391O15091 583 aaKnown RBP11.69□□□□□ -0.54
TUSC3-208ENST00000509177 ITGB3P05106 788 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 KRT19P08727 400 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 TMEM191BP0C7N4 346 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 CEBPBP17676 345 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 TGM1P22735 817 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 POLR2BP30876 1174 aaKnown RBP11.69□□□□□ -0.54
TUSC3-208ENST00000509177 PNPLA4P41247 253 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 SLC5A9Q2M3M2 681 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 SLC39A12Q504Y0 691 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 RESP18Q5W5W9 173 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 TSSK4Q6SA08 328 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 EFCAB13Q8IY85 973 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 ATAD1Q8NBU5 361 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 LEMD2Q8NC56 503 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 CLDN23Q96B33 292 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 TCEAL4Q96EI5 215 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 BORCS6Q96GS4 357 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 ANKRD36BP1Q96IX9 119 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 C7orf25Q9BPX7 421 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 EPC1Q9H2F5 836 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 BLZF1Q9H2G9 400 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 SLITRK6Q9H5Y7 841 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 PDE11AQ9HCR9 933 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 LTB4R2Q9NPC1 389 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 AVENQ9NQS1 362 aaPredicted RBP11.69□□□□□ -0.54
TUSC3-208ENST00000509177 ZSCAN32Q9NX65 697 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 CEP72Q9P209 647 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 RCOR1Q9UKL0 485 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 SMG5Q9UPR3 1016 aaKnown RBP11.69□□□□□ -0.54
TUSC3-208ENST00000509177 YIPF1Q9Y548 306 aa11.69□□□□□ -0.54
TUSC3-208ENST00000509177 CHD6Q8TD26 2715 aa11.68□□□□□ -0.54
TUSC3-208ENST00000509177 ZNF233A6NK53 670 aa11.68□□□□□ -0.54
TUSC3-208ENST00000509177 SHISA7A6NL88 538 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms