RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 C11orf63Q6NUN7 778 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 PPP1R2P3Q6NXS1 205 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 TAF2Q6P1X5 1199 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 MCOLN2Q8IZK6 566 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 ZNF564Q8TBZ8 553 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-226ENST00000508740 ACTRT1Q8TDG2 376 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 CPA5Q8WXQ8 436 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 ZNF653Q96CK0 615 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 TRIM11Q96F44 468 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 RPS6KC1Q96S38 1066 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 PNKPQ96T60 521 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 SELENOOQ9BVL4 669 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 NUP85Q9BW27 656 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 EIF2AQ9BY44 585 aaKnown RBP8.48□□□□□ -1.05
NR1I3-226ENST00000508740 BCO2Q9BYV7 579 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 CYP3A43Q9HB55 503 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 DPP3Q9NY33 737 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 SMARCAL1Q9NZC9 954 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 EHD2Q9NZN4 543 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 CNOT8Q9UFF9 292 aaKnown RBP8.48□□□□□ -1.05
NR1I3-226ENST00000508740 CHORDC1Q9UHD1 332 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-226ENST00000508740 ITGA11Q9UKX5 1188 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 AGAP1Q9UPQ3 857 aa8.48□□□□□ -1.05
NR1I3-226ENST00000508740 CCDC151A5D8V7 595 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 CEP104O60308 925 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 ADAMTS4O75173 837 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 CFHP08603 1231 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 P4HA1P13674 534 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 COMTP21964 271 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 MCM3P25205 808 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 POLR2BP30876 1174 aaKnown RBP8.47□□□□□ -1.05
NR1I3-226ENST00000508740 GRK4P32298 578 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 GUCY2FP51841 1108 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 YARSP54577 528 aaKnown RBP8.47□□□□□ -1.05
NR1I3-226ENST00000508740 CDH8P55286 799 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 NOMO3P69849 1222 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 MESDQ14696 234 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 ZBTB6Q15916 424 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 PTPROQ16827 1216 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 NBPF20Q3BBV1 942 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 WDR72Q3MJ13 1102 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 LIN9Q5TKA1 542 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 CCDC70Q6NSX1 233 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 WDR93Q6P2C0 686 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 TMCO3Q6UWJ1 677 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 CXCL17Q6UXB2 119 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 ALKAL1Q6UXT8 129 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 SCARA5Q6ZMJ2 495 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 UBE2Q1Q7Z7E8 422 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 PHF13Q86YI8 300 aaPredicted RBP8.47□□□□□ -1.05
NR1I3-226ENST00000508740 PASD1Q8IV76 773 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 TMEM130Q8N3G9 435 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 RASGEF1CQ8N431 466 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 KLHDC9Q8NEP7 349 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 RAET1EQ8TD07 263 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 TMEM40Q8WWA1 233 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 HPDLQ96IR7 371 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 VCPIP1Q96JH7 1222 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 SNX27Q96L92 541 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 ZMAT2Q96NC0 199 aaKnown RBP8.47□□□□□ -1.05
NR1I3-226ENST00000508740 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.47□□□□□ -1.05
NR1I3-226ENST00000508740 CELF4Q9BZC1 486 aaKnown RBP8.47□□□□□ -1.05
NR1I3-226ENST00000508740 TRIM6Q9C030 488 aaPredicted RBP8.47□□□□□ -1.05
NR1I3-226ENST00000508740 PRO3102Q9H379 93 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 ADAM22Q9P0K1 906 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 SRRDQ9UH36 339 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 GTF2IRD1Q9UHL9 959 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 RABGEF1Q9UJ41 708 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 TTC7AQ9ULT0 858 aaPredicted RBP8.47□□□□□ -1.05
NR1I3-226ENST00000508740 EVPLQ92817 2033 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 COL6A3P12111 3177 aa8.47□□□□□ -1.05
NR1I3-226ENST00000508740 TMEM110-MUSTN1A8MSY1 372 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 MIF4GDA9UHW6 222 aaKnown RBP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 ATP8B1O43520 1251 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 ZRANB2O95218 330 aaKnown RBP eCLIP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 LSM8O95777 96 aaKnown RBP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 PAEPP09466 180 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 ELNP15502 786 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 RRM1P23921 792 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 CCND3P30281 292 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 RAP1GAPP47736 663 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 RNASE9P60153 205 aaKnown RBP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 VSNL1P62760 191 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 MRPS6P82932 125 aaKnown RBP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 PTP4A2Q12974 167 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 ZNF394Q53GI3 561 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 GLE1Q53GS7 698 aaKnown RBP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 UBXN11Q5T124 520 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 GDF6Q6KF10 455 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 CC2D1AQ6P1N0 951 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 MON1BQ7L1V2 547 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 RSPH3Q86UC2 560 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 SESTD1Q86VW0 696 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 TTC39CQ8N584 583 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 USP38Q8NB14 1042 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 SH3TC2Q8TF17 1288 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 WHAMMQ8TF30 809 aa8.46□□□□□ -1.06
NR1I3-226ENST00000508740 HNRNPLLQ8WVV9 542 aaKnown RBP8.46□□□□□ -1.06
NR1I3-226ENST00000508740 TFAP2BQ92481 460 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms