RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 MAMDC2Q7Z304 686 aaPredicted RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 KDELC2Q7Z4H8 507 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 GALNTL5Q7Z4T8 443 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 SDCCAG8Q86SQ7 713 aaPredicted RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 OSTM1Q86WC4 334 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 ZNF575Q86XF7 245 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 NBPF5PQ86XG9 351 aaPredicted RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 DNAJC10Q8IXB1 793 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 SYTL1Q8IYJ3 562 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 MIER2Q8N344 545 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 CAMKK1Q8N5S9 505 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 ZMIZ2Q8NF64 920 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 WDR48Q8TAF3 677 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 LRTOMTQ8WZ04 291 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 JAKMIP2Q96AA8 810 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 TRIM44Q96DX7 344 aaPredicted RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 RRP36Q96EU6 259 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 MVB12AQ96EY5 273 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 CFAP53Q96M91 514 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 ANP32EQ9BTT0 268 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 UNKQ9C0B0 810 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 DHX36Q9H2U1 1008 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 STARD7Q9NQZ5 370 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 ZNF277Q9NRM2 450 aaPredicted RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 CCM2LQ9NUG4 571 aaPredicted RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 GALNT8Q9NY28 637 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 WDR35Q9P2L0 1181 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 SERPINB13Q9UIV8 391 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 SLC13A4Q9UKG4 626 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 BLOC1S6Q9UL45 172 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 ZKSCAN5Q9Y2L8 839 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 RSF1Q96T23 1441 aaPredicted RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 FFAR2O15552 330 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 HOXC11O43248 304 aaPredicted RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 FGF18O76093 207 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 URI1O94763 535 aaPredicted RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 SLC4A1P02730 911 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ALDH2P05091 517 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 APOA4P06727 396 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ADRB2P07550 413 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ADH4P08319 380 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 HNRNPLP14866 589 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 KRT15P19012 456 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 PDCP20941 246 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 PTGS1P23219 599 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ACTN2P35609 894 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 AGFG1P52594 562 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 CACNB3P54284 484 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ADKP55263 362 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 UBXN2AP68543 259 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 IL13RA1P78552 427 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ALDH6A1Q02252 535 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 IFT88Q13099 833 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 NFYCQ13952 458 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 SCARB2Q14108 478 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 TRIM29Q14134 588 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 GRM7Q14831 915 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 STARD3Q14849 445 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 PCOLCEQ15113 449 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 GPR19Q15760 415 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ZNF362Q5T0B9 420 aaPredicted RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 HAUS3Q68CZ6 603 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 RPUSD3Q6P087 351 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 APOA5Q6Q788 366 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 LMBR1LQ6UX01 489 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 CCDC73Q6ZRK6 1079 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 CXXC5Q7LFL8 322 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 OTOP2Q7RTS6 562 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 LRRTM4Q86VH4 590 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 CPOQ8IVL8 374 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 RTKN2Q8IZC4 609 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 PRR18Q8N4B5 295 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 CACTINQ8WUQ7 758 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 LARP4BQ92615 738 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ZG16BQ96DA0 208 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 TMEM176AQ96HP8 235 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 MAELQ96JY0 434 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 JAKMIP1Q96N16 626 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 NCAPGQ9BPX3 1015 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 SLF1Q9BQI6 1058 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 GPATCH1Q9BRR8 931 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 TXLNGYQ9BZA5 131 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 MS4A5Q9H3V2 200 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 INCENPQ9NQS7 918 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 TBC1D29Q9UFV1 150 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 MAGED2Q9UNF1 606 aaPredicted RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 REXO2Q9Y3B8 237 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ATP23Q9Y6H3 246 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 ABCC9O60706 1549 aa4.82□□□□□ -1.64
SMARCA5-202ENST00000508573 FOXN3O00409 490 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 B3GALNT1O75752 331 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 MYCLP12524 364 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 XBP1P17861 261 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 MAKP20794 623 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 HTR1BP28222 390 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 HSPA7P48741 367 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 MEOX1P50221 254 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 MECP2P51608 486 aaKnown RBP4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 ITGA8P53708 1063 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms