RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ZFYVE19Q96K21 471 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 TMEM209Q96SK2 561 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 EDEM2Q9BV94 578 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 MRPL4Q9BYD3 311 aaKnown RBP10.25□□□□□ -0.77
NEDD9-211ENST00000508546 CRISPLD1Q9H336 500 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 VPS45Q9NRW7 570 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 ARHGAP28Q9P2N2 729 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 NEUROG3Q9Y4Z2 214 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-211ENST00000508546 ACACAQ13085 2346 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 PTPRDP23468 1912 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 GON4LQ3T8J9 2241 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 SCN1AP35498 2009 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 OR6C75A6NL08 312 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 MEFVO15553 781 aaPredicted RBP10.24□□□□□ -0.77
NEDD9-211ENST00000508546 ATG13O75143 517 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 CCDC192P0DO97 292 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 MCM7P33993 719 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 ALDH1A3P47895 512 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 NPTX2P47972 431 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 AARSP49588 968 aaKnown RBP eCLIP10.24□□□□□ -0.77
NEDD9-211ENST00000508546 CACNB1Q02641 598 aaPredicted RBP10.24□□□□□ -0.77
NEDD9-211ENST00000508546 DUSP4Q13115 394 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 PTPAQ15257 358 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 ITPRIPL2Q3MIP1 535 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 TMEM196Q5HYL7 178 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 GPR158Q5T848 1215 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 HAUS3Q68CZ6 603 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 CENPPQ6IPU0 288 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 PKN3Q6P5Z2 889 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 MPZL3Q6UWV2 235 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 TAS1R3Q7RTX0 852 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 DNAJB7Q7Z6W7 309 aaPredicted RBP10.24□□□□□ -0.77
NEDD9-211ENST00000508546 PSMG2Q969U7 264 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 TARS2Q9BW92 718 aaKnown RBP10.24□□□□□ -0.77
NEDD9-211ENST00000508546 BHMT2Q9H2M3 363 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 POLD4Q9HCU8 107 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 HSFX1Q9UBD0 423 aa10.24□□□□□ -0.77
NEDD9-211ENST00000508546 RBM19Q9Y4C8 960 aaKnown RBP10.24□□□□□ -0.77
NEDD9-211ENST00000508546 KALRNO60229 2985 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 ZNF462Q96JM2 2506 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 EIF4E1BA6NMX2 242 aaKnown RBP10.23□□□□□ -0.77
NEDD9-211ENST00000508546 CCDC169A6NNP5 214 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 C4orf47A7E2U8 309 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 TRDMT1O14717 391 aaKnown RBP10.23□□□□□ -0.77
NEDD9-211ENST00000508546 PRAMEF12O95522 483 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 PRB1P04280 392 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 CAPNS1P04632 268 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 GABRR2P28476 465 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 LRPAP1P30533 357 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 PXNP49023 591 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-211ENST00000508546 MCM2P49736 904 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 PEX3P56589 373 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 TNK2Q07912 1038 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 GRSF1Q12849 480 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEDD9-211ENST00000508546 ORC2Q13416 577 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-211ENST00000508546 MYBPC2Q14324 1141 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 ECM1Q16610 540 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 SLC10A6Q3KNW5 377 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 PLK5Q496M5 336 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 ARHGAP15Q53QZ3 475 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 GPIHBP1Q8IV16 184 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 TTC8Q8TAM2 541 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 PGLYRP2Q96PD5 576 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 TCHPQ9BT92 498 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 ATXN3LQ9H3M9 355 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 TASP1Q9H6P5 420 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 PLEKHA5Q9HAU0 1116 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 THG1LQ9NWX6 298 aaKnown RBP10.23□□□□□ -0.77
NEDD9-211ENST00000508546 ZMYM5Q9UJ78 669 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 SLC8A2Q9UPR5 921 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 ANAPC1Q9H1A4 1944 aa10.23□□□□□ -0.77
NEDD9-211ENST00000508546 MYO18BQ8IUG5 2567 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 MTMR11A4FU01 709 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 TOM1L1O75674 476 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 OR4Q2P0C623 313 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 OR52Z1P0C646 297 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 TYMPP19971 482 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 DMP1Q13316 513 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-211ENST00000508546 TRIM29Q14134 588 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 NOLC1Q14978 699 aaKnown RBP eCLIP10.22□□□□□ -0.77
NEDD9-211ENST00000508546 KARSQ15046 597 aaKnown RBP10.22□□□□□ -0.77
NEDD9-211ENST00000508546 ANKRD1Q15327 319 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 ELF2Q15723 593 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 ZBTB6Q15916 424 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 DAB2IPQ5VWQ8 1189 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 FSTL4Q6MZW2 842 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 USP37Q86T82 979 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 ITIH5Q86UX2 942 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 DAW1Q8N136 415 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 ATAD1Q8NBU5 361 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 GLIS3Q8NEA6 775 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 ZBTB45Q96K62 511 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-211ENST00000508546 FAM83CQ9BQN1 747 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 DUSP15Q9H1R2 295 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-211ENST00000508546 C17orf75Q9HAS0 396 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 KMT5AQ9NQR1 393 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 GKN1Q9NS71 199 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 TUBGCP4Q9UGJ1 667 aa10.22□□□□□ -0.77
NEDD9-211ENST00000508546 MSRB2Q9Y3D2 182 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms