RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 XYLT2Q9H1B5 865 aa11.33□□□□□ -0.6
SKI-204ENST00000508416 PLEKHA4Q9H4M7 779 aa11.33□□□□□ -0.6
SKI-204ENST00000508416 NXF1Q9UBU9 619 aaKnown RBP11.33□□□□□ -0.6
SKI-204ENST00000508416 L1RE1Q9UN81 338 aa11.33□□□□□ -0.6
SKI-204ENST00000508416 TCF20Q9UGU0 1960 aaKnown RBP11.33□□□□□ -0.6
SKI-204ENST00000508416 WDR27A2RRH5 827 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 ABLIM3O94929 683 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 OR4Q2P0C623 313 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 CCDC192P0DO97 292 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 CPB1P15086 417 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 ELF1P32519 619 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 PIK3CAP42336 1068 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 LHX1P48742 406 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 MXI1P50539 228 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 KCNQ1P51787 676 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 TNNC1P63316 161 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 SKOR2Q2VWA4 1001 aaPredicted RBP11.32□□□□□ -0.6
SKI-204ENST00000508416 PUS10Q3MIT2 529 aaKnown RBP11.32□□□□□ -0.6
SKI-204ENST00000508416 ZNF667Q5HYK9 610 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 RARS2Q5T160 578 aaKnown RBP11.32□□□□□ -0.6
SKI-204ENST00000508416 TPGS2Q68CL5 300 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 PTCRAQ6ISU1 281 aaPredicted RBP11.32□□□□□ -0.6
SKI-204ENST00000508416 CES5AQ6NT32 575 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 TMC5Q6UXY8 1006 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 RNF19BQ6ZMZ0 732 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 LIMS2Q7Z4I7 341 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 ADGRF2Q8IZF7 708 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 OR10T2Q8NGX3 314 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 TAF4BQ92750 862 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 SLC35C1Q96A29 364 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 TMEM209Q96SK2 561 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 RTP3Q9BQQ7 232 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 PI4K2AQ9BTU6 479 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 S1PR5Q9H228 398 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 ADAM7Q9H2U9 754 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 VRTNQ9H8Y1 702 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 SFXN1Q9H9B4 322 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.32□□□□□ -0.64e-7■■■■■ 128.6
SKI-204ENST00000508416 ANO10Q9NW15 660 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 DDX43Q9NXZ2 648 aaKnown RBP11.32□□□□□ -0.6
SKI-204ENST00000508416 FBXW11Q9UKB1 542 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 POLIQ9UNA4 740 aa11.32□□□□□ -0.6
SKI-204ENST00000508416 CCDC195A0A1B0GUA6 201 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 GRXCR2A6NFK2 248 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 PRRG1O14668 218 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 GABRDO14764 452 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 MBTPS2O43462 519 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 RFPL2O75678 378 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 ZMYND10O75800 440 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 ASS1P00966 412 aaKnown RBP11.31□□□□□ -0.6
SKI-204ENST00000508416 FAM163BP0C2L3 166 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 BMP1P13497 986 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 ATF2P15336 505 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 GNL1P36915 607 aaPredicted RBP11.31□□□□□ -0.6
SKI-204ENST00000508416 MARSP56192 900 aaKnown RBP11.31□□□□□ -0.6
SKI-204ENST00000508416 MYL7Q01449 175 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 ITIH3Q06033 890 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 GPR17Q13304 367 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 SMAD4Q13485 552 aaKnown RBP11.31□□□□□ -0.6
SKI-204ENST00000508416 STX1AQ16623 288 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 UVSSAQ2YD98 709 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 CBWD6Q4V339 395 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 CBWD3Q5JTY5 395 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 CBWD5Q5RIA9 395 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 LIN9Q5TKA1 542 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 SPOPLQ6IQ16 392 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 OSTM1Q86WC4 334 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 IRF2BP1Q8IU81 584 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 TRIM59Q8IWR1 403 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 SMRP1Q8NCR6 262 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 CCDC150Q8NCX0 1101 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 FBXL13Q8NEE6 735 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 SPATA18Q8TC71 538 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 KBTBD7Q8WVZ9 684 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 SEMA4DQ92854 862 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 ACBD6Q9BR61 282 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 MRPL45Q9BRJ2 306 aaKnown RBP11.31□□□□□ -0.6
SKI-204ENST00000508416 IMPG2Q9BZV3 1241 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 ZCWPW1Q9H0M4 648 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 SNX25Q9H3E2 840 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 RAB20Q9NX57 234 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 AFF4Q9UHB7 1163 aaKnown RBP11.31□□□□□ -0.6
SKI-204ENST00000508416 FAM50BQ9Y247 325 aa11.31□□□□□ -0.6
SKI-204ENST00000508416 USP15Q9Y4E8 981 aaPredicted RBP11.31□□□□□ -0.6
SKI-204ENST00000508416 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.31□□□□□ -0.6
SKI-204ENST00000508416 LRRN2O75325 713 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 TACC1O75410 805 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 LETM1O95202 739 aaPredicted RBP11.3□□□□□ -0.6
SKI-204ENST00000508416 SEC24AO95486 1093 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 C8AP07357 584 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 PDGFRBP09619 1106 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 WEE2P0C1S8 567 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 P4HA1P13674 534 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 WARSP23381 471 aaKnown RBP11.3□□□□□ -0.6
SKI-204ENST00000508416 ACAT1P24752 427 aaKnown RBP11.3□□□□□ -0.6
SKI-204ENST00000508416 LMO2P25791 158 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 PCSK1P29120 753 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 FMO5P49326 533 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 CDR1P51861 262 aa11.3□□□□□ -0.6
SKI-204ENST00000508416 CDH8P55286 799 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms