RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 AP5Z1O43299 807 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 TLX3O43711 291 aaPredicted RBP7.94□□□□□ -1.14
VCAN-207ENST00000507162 RECQL4O94761 1208 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 C6P13671 934 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 HLA-EP13747 358 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 GJA4P35212 333 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 HNRNPUQ00839 825 aaKnown RBP eCLIP7.94□□□□□ -1.14
VCAN-207ENST00000507162 RPL6Q02878 288 aaKnown RBP7.94□□□□□ -1.14
VCAN-207ENST00000507162 ZNF33AQ06730 810 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 BYSLQ13895 437 aaKnown RBP7.94□□□□□ -1.14
VCAN-207ENST00000507162 MXD4Q14582 209 aaPredicted RBP7.94□□□□□ -1.14
VCAN-207ENST00000507162 EMC2Q15006 297 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 NAB2Q15742 525 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 UPP1Q16831 310 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 XKR9Q5GH70 373 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 SYNE3Q6ZMZ3 975 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 PRICKLE2Q7Z3G6 844 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 RABEPKQ7Z6M1 372 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 DNAJB7Q7Z6W7 309 aaPredicted RBP7.94□□□□□ -1.14
VCAN-207ENST00000507162 MICU3Q86XE3 530 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 TMC8Q8IU68 726 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 NOSTRINQ8IVI9 506 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 MB21D2Q8IYB1 491 aaPredicted RBP7.94□□□□□ -1.14
VCAN-207ENST00000507162 RASEFQ8IZ41 740 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 C3orf58Q8NDZ4 430 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 CCDC26Q8TAB7 109 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 OLIG1Q8TAK6 271 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 RHBDD1Q8TEB9 315 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 HMGB4Q8WW32 186 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 TBC1D32Q96NH3 1257 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 PGLYRP2Q96PD5 576 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 TRIM4Q9C037 500 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 SLKQ9H2G2 1235 aaPredicted RBP7.94□□□□□ -1.14
VCAN-207ENST00000507162 TASP1Q9H6P5 420 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 PCOLCE2Q9UKZ9 415 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 SLC27A5Q9Y2P5 690 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 YIPF1Q9Y548 306 aa7.94□□□□□ -1.14
VCAN-207ENST00000507162 LRRK2Q5S007 2527 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 TMEM189-UBE2V1I3L0A0 370 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 TULP1O00294 542 aaPredicted RBP7.93□□□□□ -1.14
VCAN-207ENST00000507162 SH2B2O14492 632 aaPredicted RBP7.93□□□□□ -1.14
VCAN-207ENST00000507162 CBFA2T3O75081 653 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 PSMD10O75832 226 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 HNRNPLP14866 589 aaKnown RBP eCLIP7.93□□□□□ -1.14
VCAN-207ENST00000507162 LIG1P18858 919 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 MARCKSP29966 332 aaPredicted RBP7.93□□□□□ -1.14
VCAN-207ENST00000507162 HOXD12P35452 270 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 QARSP47897 775 aaKnown RBP7.93□□□□□ -1.14
VCAN-207ENST00000507162 PTH1RQ03431 593 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 BFSP1Q12934 665 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 DUSP4Q13115 394 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 PLD1Q13393 1074 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 CRY1Q16526 586 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 MAP7D1Q3KQU3 841 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 SPDYCQ5MJ68 293 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 TMEM92Q6UXU6 159 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 OTUD6AQ7L8S5 288 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 GLRX5Q86SX6 157 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 RGL4Q8IZJ4 473 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 REXO1Q8N1G1 1221 aaKnown RBP7.93□□□□□ -1.14
VCAN-207ENST00000507162 ASAP3Q8TDY4 903 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 USP33Q8TEY7 942 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 WHAMMQ8TF30 809 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 MTRQ99707 1265 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 SLC46A2Q9BY10 475 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 LRRC2Q9BYS8 371 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 DNAJC25Q9H1X3 360 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 IL25Q9H293 177 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 C6orf50Q9HD87 102 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 KCNK4Q9NYG8 393 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 MAFFQ9ULX9 164 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 TBX20Q9UMR3 447 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 NUB1Q9Y5A7 615 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 GTF3C3Q9Y5Q9 886 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 ITPR3Q14573 2671 aa7.93□□□□□ -1.14
VCAN-207ENST00000507162 EML1O00423 815 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 PODXLO00592 558 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 SYN3O14994 580 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 ZBTB39O15060 712 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 MARCH6O60337 910 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 DKC1O60832 514 aaKnown RBP eCLIP7.92□□□□□ -1.14
VCAN-207ENST00000507162 GJB3O75712 270 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 SOAT2O75908 522 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 KRT38O76015 456 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 KLF8O95600 359 aaPredicted RBP7.92□□□□□ -1.14
VCAN-207ENST00000507162 FGF19O95750 216 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 OR4Q2P0C623 313 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 AVPR1AP37288 418 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 IL12RB1P42701 662 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 CDR1P51861 262 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 CCDC173Q0VFZ6 552 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 CAPSQ13938 189 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 MRPL58Q14197 206 aaKnown RBP7.92□□□□□ -1.14
VCAN-207ENST00000507162 TAF12Q16514 161 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 PREPLQ4J6C6 727 aaPredicted RBP7.92□□□□□ -1.14
VCAN-207ENST00000507162 PEAR1Q5VY43 1037 aaPredicted RBP7.92□□□□□ -1.14
VCAN-207ENST00000507162 ZNF280DQ6N043 979 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 CPA6Q8N4T0 437 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 MAB21L3Q8N8X9 362 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 TXNDC5Q8NBS9 432 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms