RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 GBP6Q6ZN66 633 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 OSTM1Q86WC4 334 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 METTL23Q86XA0 190 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 ADGRF2Q8IZF7 708 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 MMS19Q96T76 1030 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 ANP32EQ9BTT0 268 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 EMILIN2Q9BXX0 1053 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 NIF3L1Q9GZT8 377 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 INTS2Q9H0H0 1204 aaKnown RBP13.76□□□□□ -0.21
TCOF1-210ENST00000506767 SDCBP2Q9H190 292 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 FBXL5Q9UKA1 691 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 TRANK1O15050 2925 aa13.76□□□□□ -0.21
TCOF1-210ENST00000506767 LGALS16A8MUM7 142 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 ADAM12O43184 909 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 CLASP2O75122 1294 aaKnown RBP13.75□□□□□ -0.21
TCOF1-210ENST00000506767 C1RP00736 705 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 TPM2P07951 284 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 RPL17P18621 184 aaKnown RBP13.75□□□□□ -0.21
TCOF1-210ENST00000506767 PON1P27169 355 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 LHX1P48742 406 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 NDUFV1P49821 464 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 CDH8P55286 799 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 TPM4P67936 248 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 KCNC3Q14003 757 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 EXOC3L4Q17RC7 722 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 CTXN3Q4LDR2 81 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 TCEAL5Q5H9L2 206 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 PHLDB3Q6NSJ2 640 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 TRIM65Q6PJ69 517 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 GAS2L3Q86XJ1 694 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 CDCA3Q99618 268 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-210ENST00000506767 ACBD6Q9BR61 282 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 MRPL45Q9BRJ2 306 aaKnown RBP13.75□□□□□ -0.21
TCOF1-210ENST00000506767 CRACR2AQ9BSW2 395 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 FAM124BQ9H5Z6 455 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-210ENST00000506767 SMYD3Q9H7B4 428 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 CYP3A43Q9HB55 503 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.75□□□□□ -0.213e-6■■■□□ 16.8
TCOF1-210ENST00000506767 GCNT4Q9P109 453 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 NME7Q9Y5B8 376 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 CDY1Q9Y6F8 540 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 A0A0C4DFX4 3053 aa13.75□□□□□ -0.21
TCOF1-210ENST00000506767 A0A1B0GTH6 734 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 OR6C75A6NL08 312 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 ADH1AP07327 375 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 FOSL2P15408 326 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 LMO2P25791 158 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 OR1D2P34982 312 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 CA8P35219 290 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 GNL1P36915 607 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-210ENST00000506767 RAP1GAPP47736 663 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 NRIP1P48552 1158 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 INCA1Q0VD86 236 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 HYAL1Q12794 435 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 RAB33AQ14088 237 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 COL19A1Q14993 1142 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 LILRA6Q6PI73 481 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 ARHGEF19Q8IW93 802 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.74□□□□□ -0.21
TCOF1-210ENST00000506767 THEM5Q8N1Q8 247 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 UBR7Q8N806 425 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 RNF214Q8ND24 703 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 OR10T2Q8NGX3 314 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 MAFAQ8NHW3 353 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-210ENST00000506767 SLC22A17Q8WUG5 538 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 PPP2R3CQ969Q6 453 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 NT5C1BQ96P26 610 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 ZCWPW1Q9H0M4 648 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 TLE6Q9H808 572 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 SIX2Q9NPC8 291 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 RTN4Q9NQC3 1192 aaKnown RBP13.74□□□□□ -0.21
TCOF1-210ENST00000506767 DDX43Q9NXZ2 648 aaKnown RBP13.74□□□□□ -0.21
TCOF1-210ENST00000506767 PLXNA3P51805 1871 aa13.74□□□□□ -0.21
TCOF1-210ENST00000506767 WDR27A2RRH5 827 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 PES1O00541 588 aaKnown RBP13.73□□□□□ -0.21
TCOF1-210ENST00000506767 PER2O15055 1255 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 HCRTO43612 131 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 ABLIM3O94929 683 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 WEE2P0C1S8 567 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 TBXAS1P24557 533 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-210ENST00000506767 KLRC2P26717 231 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 GTF2F1P35269 517 aaKnown RBP eCLIP13.73□□□□□ -0.21
TCOF1-210ENST00000506767 CLCN4P51793 760 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 FANCCQ00597 558 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 ROR1Q01973 937 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 GCNT1Q02742 428 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 LRMPQ12912 555 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 CUL2Q13617 745 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 NR1I3Q14994 352 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 FKBP15Q5T1M5 1219 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 SCARA5Q6ZMJ2 495 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 RBM23Q86U06 439 aaKnown RBP13.73□□□□□ -0.21
TCOF1-210ENST00000506767 PPFIBP1Q86W92 1011 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 UNC93AQ86WB7 457 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 OR6B3Q8NGW1 331 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 WHAMMQ8TF30 809 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 NAP1L5Q96NT1 182 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-210ENST00000506767 ERGIC2Q96RQ1 377 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 TMEM209Q96SK2 561 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 PKMYT1Q99640 499 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms