RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 HACE1Q8IYU2 909 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 LRRC52Q8N7C0 313 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 UBL4BQ8N7F7 174 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 SPATA4Q8NEY3 305 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 ZNF564Q8TBZ8 553 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 PPP1R13LQ8WUF5 828 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 RUBCNQ92622 972 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 LRCH3Q96II8 777 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 LHX5Q9H2C1 402 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 ANKZF1Q9H8Y5 726 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 MRPL47Q9HD33 250 aaKnown RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 ADAM22Q9P0K1 906 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 NXF1Q9UBU9 619 aaKnown RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 PARP2Q9UGN5 583 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 TTC7AQ9ULT0 858 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 BARX2Q9UMQ3 279 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 PACSIN2Q9UNF0 486 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 COG5Q9UP83 839 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 NOC2LQ9Y3T9 749 aaKnown RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 CEP83Q9Y592 693 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 EYSQ5T1H1 3165 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 PDCD11Q14690 1871 aaKnown RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 CCDC151A5D8V7 595 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 TLR3O15455 904 aaKnown RBP8.56□□□□□ -1.04
COL4A5-208ENST00000505728 ATP8B1O43520 1251 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 CEP104O60308 925 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 CAND2O75155 1236 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 CILPO75339 1184 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 ERLIN1O75477 346 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 RPS6KA5O75582 802 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 RECQL4O94761 1208 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 CALCAP01258 141 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 RHOXF2BP0C7M4 288 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 VDRP11473 427 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 ZSCAN20P17040 1043 aaPredicted RBP8.56□□□□□ -1.04
COL4A5-208ENST00000505728 CAPN2P17655 700 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 BRD2P25440 801 aaKnown RBP8.56□□□□□ -1.04
COL4A5-208ENST00000505728 CTNNA2P26232 953 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 PNPLA4P41247 253 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 CLCN6P51797 869 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 RAD23BP54727 409 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 TNNC1P63316 161 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 MGAT3Q09327 533 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 INCA1Q0VD86 236 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 PTP4A2Q12974 167 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 PTK7Q13308 1070 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 ITGA7Q13683 1181 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 MESDQ14696 234 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 CNGA2Q16280 664 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 PPP2R5EQ16537 467 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 FAM47CQ5HY64 1035 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 FAM26DQ5JW98 314 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 PLEKHA7Q6IQ23 1121 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 WDR93Q6P2C0 686 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 TMCO3Q6UWJ1 677 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 SCARA5Q6ZMJ2 495 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 NECAB2Q7Z6G3 386 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 C7orf61Q8IZ16 206 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 ANKLE1Q8NAG6 615 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 USP38Q8NB14 1042 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 NOA1Q8NC60 698 aaKnown RBP8.56□□□□□ -1.04
COL4A5-208ENST00000505728 WHAMMQ8TF30 809 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 CPA5Q8WXQ8 436 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 TMEM176AQ96HP8 235 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 NAP1L3Q99457 506 aaPredicted RBP8.56□□□□□ -1.04
COL4A5-208ENST00000505728 GDF15Q99988 308 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 RHOXF2Q9BQY4 288 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.56□□□□□ -1.04
COL4A5-208ENST00000505728 SEZ6LQ9BYH1 1024 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 SENP6Q9GZR1 1112 aaPredicted RBP8.56□□□□□ -1.04
COL4A5-208ENST00000505728 DNAI2Q9GZS0 605 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 SDCBP2Q9H190 292 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 CARD9Q9H257 536 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 NXF3Q9H4D5 531 aaKnown RBP8.56□□□□□ -1.04
COL4A5-208ENST00000505728 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
COL4A5-208ENST00000505728 OGDHLQ9ULD0 1010 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 ST3GAL5Q9UNP4 418 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 IPPQ9Y573 584 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 SQORQ9Y6N5 450 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 SCINQ9Y6U3 715 aa8.56□□□□□ -1.04
COL4A5-208ENST00000505728 LTBP2Q14767 1821 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 SMIM28A0A1B0GU29 152 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 A0A1W2PPC1 479 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 CCDC66A2RUB6 948 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 CCDC188H7C350 402 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 MYO1FO00160 1098 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 PGRMC1O00264 195 aaKnown RBP8.55□□□□□ -1.04
COL4A5-208ENST00000505728 PIRO00625 290 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 CHRNA1P02708 482 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 CFHP08603 1231 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 CD19P15391 556 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 SYN1P17600 705 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 COMTP21964 271 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 MMP8P22894 467 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 RRM1P23921 792 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 LRPAP1P30533 357 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 GUCY2FP51841 1108 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 CDH8P55286 799 aa8.55□□□□□ -1.04
COL4A5-208ENST00000505728 TAP1Q03518 808 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms