RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 CACNA2D4Q7Z3S7 1137 aa18.34■□□□□ 0.53
DDR1-257ENST00000505534 TMEM130Q8N3G9 435 aa18.34■□□□□ 0.53
DDR1-257ENST00000505534 ATAD1Q8NBU5 361 aa18.34■□□□□ 0.53
DDR1-257ENST00000505534 BPIFB1Q8TDL5 484 aa18.34■□□□□ 0.53
DDR1-257ENST00000505534 TSPAN18Q96SJ8 248 aa18.34■□□□□ 0.53
DDR1-257ENST00000505534 LLPHQ9BRT6 129 aaKnown RBP18.34■□□□□ 0.53
DDR1-257ENST00000505534 ARRDC1-AS1Q9H2J1 176 aa18.34■□□□□ 0.53
DDR1-257ENST00000505534 TASP1Q9H6P5 420 aa18.34■□□□□ 0.53
DDR1-257ENST00000505534 ZFHX4Q86UP3 3567 aa18.33■□□□□ 0.53
DDR1-257ENST00000505534 LAD1O00515 517 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 PMLP29590 882 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 PPP2R3AQ06190 1150 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 PTPAQ15257 358 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 SF3A2Q15428 464 aaKnown RBP18.33■□□□□ 0.52
DDR1-257ENST00000505534 KYAT1Q16773 422 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 ITPRIPL2Q3MIP1 535 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 N4BP2L1Q5TBK1 243 aaPredicted RBP18.33■□□□□ 0.52
DDR1-257ENST00000505534 KCNK18Q7Z418 384 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 GAB3Q8WWW8 586 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 TMEM209Q96SK2 561 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 HAPLN2Q9GZV7 340 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 THG1LQ9NWX6 298 aaKnown RBP18.33■□□□□ 0.52
DDR1-257ENST00000505534 SCN1AP35498 2009 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 CACNA1GO43497 2377 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 CHD6Q8TD26 2715 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 TCHHQ07283 1943 aa18.33■□□□□ 0.52
DDR1-257ENST00000505534 PP2D1A8MPX8 630 aa18.32■□□□□ 0.52
DDR1-257ENST00000505534 RPP40O75818 363 aaKnown RBP18.32■□□□□ 0.52
DDR1-257ENST00000505534 EPN2O95208 641 aa18.32■□□□□ 0.52
DDR1-257ENST00000505534 PAX3P23760 479 aa18.32■□□□□ 0.52
DDR1-257ENST00000505534 CDC25AP30304 524 aa18.32■□□□□ 0.52
DDR1-257ENST00000505534 HOXC13P31276 330 aa18.32■□□□□ 0.52
DDR1-257ENST00000505534 RAP1GAPP47736 663 aa18.32■□□□□ 0.52
DDR1-257ENST00000505534 TUFMP49411 452 aaKnown RBP18.32■□□□□ 0.52
DDR1-257ENST00000505534 SHC2P98077 582 aa18.32■□□□□ 0.52
DDR1-257ENST00000505534 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
DDR1-257ENST00000505534 TNK2Q07912 1038 aa18.32■□□□□ 0.52
DDR1-257ENST00000505534 TTC9BQ8N6N2 239 aa18.32■□□□□ 0.52
DDR1-257ENST00000505534 MMTAG2Q9BU76 263 aaKnown RBP18.32■□□□□ 0.52
DDR1-257ENST00000505534 PCDHB6Q9Y5E3 794 aa18.32■□□□□ 0.52
DDR1-257ENST00000505534 LACTBL1A8MY62 500 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 H0YCG3 227 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 EXTL3O43909 919 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 ATG13O75143 517 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 SOAT2O75908 522 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 PRAMEF12O95522 483 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 ODC1P11926 461 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 U2AF2P26368 475 aaKnown RBP eCLIP18.31■□□□□ 0.52
DDR1-257ENST00000505534 CDC25CP30307 473 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 PRPHP41219 470 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 TNFSF9P41273 254 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 MCM2P49736 904 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 TOB1P50616 345 aaPredicted RBP18.31■□□□□ 0.52
DDR1-257ENST00000505534 LILRA4P59901 499 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 HMGN5P82970 282 aaKnown RBP18.31■□□□□ 0.52
DDR1-257ENST00000505534 RAD51AP2Q09MP3 1159 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 IL17AQ16552 155 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 DTHD1Q6ZMT9 781 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 CCDC83Q8IWF9 413 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 KCTD17Q8N5Z5 321 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 SENP8Q96LD8 212 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 KIF2CQ99661 725 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 KCND2Q9NZV8 630 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 ZMYM5Q9UJ78 669 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 LIMCH1Q9UPQ0 1083 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 PCDHGA5Q9Y5G8 931 aa18.31■□□□□ 0.52
DDR1-257ENST00000505534 TSC2P49815 1807 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 AKAP3O75969 853 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 ADRB2P07550 413 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 CCDC192P0DO97 292 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 GUCY2FP51841 1108 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 VEPH1Q14D04 833 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 CCDC6Q16204 474 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 TMEM196Q5HYL7 178 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 PLA2G2CQ5R387 149 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 STPG1Q5TH74 334 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 SPATA1Q5VX52 437 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 KBTBD6Q86V97 674 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 SYT2Q8N9I0 419 aaPredicted RBP18.3■□□□□ 0.52
DDR1-257ENST00000505534 KCNN1Q92952 543 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 BICD1Q96G01 975 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 GCNAQ96QF7 691 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 RPF1Q9H9Y2 349 aaKnown RBP18.3■□□□□ 0.52
DDR1-257ENST00000505534 GKN1Q9NS71 199 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 LARSQ9P2J5 1176 aaKnown RBP18.3■□□□□ 0.52
DDR1-257ENST00000505534 SLC8A2Q9UPR5 921 aa18.3■□□□□ 0.52
DDR1-257ENST00000505534 OBSL1O75147 1896 aa18.29■□□□□ 0.52
DDR1-257ENST00000505534 NUP205Q92621 2012 aa18.29■□□□□ 0.52
DDR1-257ENST00000505534 TRDMT1O14717 391 aaKnown RBP18.29■□□□□ 0.52
DDR1-257ENST00000505534 PXNP49023 591 aaPredicted RBP18.29■□□□□ 0.52
DDR1-257ENST00000505534 CYP4F8P98187 520 aa18.29■□□□□ 0.52
DDR1-257ENST00000505534 GRSF1Q12849 480 aaKnown RBP eCLIP18.29■□□□□ 0.52
DDR1-257ENST00000505534 ENOX2Q16206 610 aaKnown RBP18.29■□□□□ 0.52
DDR1-257ENST00000505534 HYIQ5T013 277 aa18.29■□□□□ 0.52
DDR1-257ENST00000505534 PKN3Q6P5Z2 889 aa18.29■□□□□ 0.52
DDR1-257ENST00000505534 CAMKK1Q8N5S9 505 aa18.29■□□□□ 0.52
DDR1-257ENST00000505534 FAM184AQ8NB25 1140 aa18.29■□□□□ 0.52
DDR1-257ENST00000505534 ZC3H10Q96K80 434 aaKnown RBP18.29■□□□□ 0.52
DDR1-257ENST00000505534 SEPT5Q99719 369 aaPredicted RBP18.29■□□□□ 0.52
DDR1-257ENST00000505534 LPIN3Q9BQK8 851 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms