RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 FOXN3O00409 490 aaPredicted RBP21.2■□□□□ 0.98
ACTN4-208ENST00000497637 FAM189A1O60320 539 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 URI1O94763 535 aaPredicted RBP21.2■□□□□ 0.98
ACTN4-208ENST00000497637 CHRNA1P02708 482 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 FAM228BP0C875 321 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 GHRP10912 638 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 HOXB8P17481 243 aaPredicted RBP21.2■□□□□ 0.98
ACTN4-208ENST00000497637 AP3M2P53677 418 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 CDC42EP1Q00587 391 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 SURF1Q15526 300 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 ENOX2Q16206 610 aaKnown RBP21.2■□□□□ 0.98
ACTN4-208ENST00000497637 KIAA0319LQ8IZA0 1049 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 TCHPQ9BT92 498 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.2■□□□□ 0.98
ACTN4-208ENST00000497637 PDE11AQ9HCR9 933 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 SETD4Q9NVD3 440 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 ADAMTS1Q9UHI8 967 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 TFR2Q9UP52 801 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 PCDHGC5Q9Y5F6 944 aa21.2■□□□□ 0.98
ACTN4-208ENST00000497637 A0A087WZ62 844 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 CTAGE9A4FU28 777 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 CTIFO43310 598 aaKnown RBP21.19■□□□□ 0.98
ACTN4-208ENST00000497637 LRRN2O75325 713 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 MFAP3P55082 362 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 WNT7BP56706 349 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 BMS1Q14692 1282 aaKnown RBP21.19■□□□□ 0.98
ACTN4-208ENST00000497637 DUSP6Q16828 381 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 ARHGAP44Q17R89 818 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 TAF2Q6P1X5 1199 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 ENOSF1Q7L5Y1 443 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 SRGAP1Q7Z6B7 1085 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 RSPH3Q86UC2 560 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 ZNF410Q86VK4 478 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 HELQQ8TDG4 1101 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 NAPGQ99747 312 aaPredicted RBP21.19■□□□□ 0.98
ACTN4-208ENST00000497637 FDXACB1Q9BRP7 624 aaPredicted RBP21.19■□□□□ 0.98
ACTN4-208ENST00000497637 SYT11Q9BT88 431 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 S1PR5Q9H228 398 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 MINDY3Q9H8M7 445 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 CPSF3Q9UKF6 684 aaKnown RBP21.19■□□□□ 0.98
ACTN4-208ENST00000497637 NRCAMQ92823 1304 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 TTC3P53804 2025 aa21.19■□□□□ 0.98
ACTN4-208ENST00000497637 MBLAC1A4D2B0 266 aaPredicted RBP21.18■□□□□ 0.98
ACTN4-208ENST00000497637 SLU7O95391 586 aaKnown RBP21.18■□□□□ 0.98
ACTN4-208ENST00000497637 STAG3L1P0CL83 205 aa21.18■□□□□ 0.98
ACTN4-208ENST00000497637 PNMA6AP0CW24 399 aaPredicted RBP21.18■□□□□ 0.98
ACTN4-208ENST00000497637 TNNI1P19237 187 aa21.18■□□□□ 0.98
ACTN4-208ENST00000497637 POU5F1Q01860 360 aaKnown RBP21.18■□□□□ 0.98
ACTN4-208ENST00000497637 NAB2Q15742 525 aa21.18■□□□□ 0.98
ACTN4-208ENST00000497637 AMHR2Q16671 573 aa21.18■□□□□ 0.98
ACTN4-208ENST00000497637 EEF1DP3Q658K8 133 aa21.18■□□□□ 0.98
ACTN4-208ENST00000497637 NPAS4Q8IUM7 802 aa21.18■□□□□ 0.98
ACTN4-208ENST00000497637 RNF10Q8N5U6 811 aaKnown RBP21.18■□□□□ 0.98
ACTN4-208ENST00000497637 SLC30A5Q8TAD4 765 aa21.18■□□□□ 0.98
ACTN4-208ENST00000497637 ZNF668Q96K58 619 aaPredicted RBP21.18■□□□□ 0.98
ACTN4-208ENST00000497637 KREMEN1Q96MU8 473 aa21.18■□□□□ 0.98
ACTN4-208ENST00000497637 PCDHB12Q9Y5F1 795 aa21.18■□□□□ 0.98
ACTN4-208ENST00000497637 CEP250Q9BV73 2442 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 DDX3XO00571 662 aaKnown RBP eCLIP21.17■□□□□ 0.98
ACTN4-208ENST00000497637 PER2O15055 1255 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 B4GALT5O43286 388 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 HLA-DRAP01903 254 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 VTNP04004 478 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 HARSP12081 509 aaKnown RBP21.17■□□□□ 0.98
ACTN4-208ENST00000497637 ADAM17P78536 824 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 LPIN1Q14693 890 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 TDRD10Q5VZ19 366 aaKnown RBP21.17■□□□□ 0.98
ACTN4-208ENST00000497637 ANKRD54Q6NXT1 300 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 FAM71AQ8IYT1 594 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 OLIG1Q8TAK6 271 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 LMBR1Q8WVP7 490 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 SHC3Q92529 594 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 SECISBP2LQ93073 1101 aaKnown RBP21.17■□□□□ 0.98
ACTN4-208ENST00000497637 NECTIN4Q96NY8 510 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 FTHL17Q9BXU8 183 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 AAASQ9NRG9 546 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 NAGPAQ9UK23 515 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 INTUQ9ULD6 942 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 DUSP10Q9Y6W6 482 aa21.17■□□□□ 0.98
ACTN4-208ENST00000497637 SMIM35A0A1B0GVV1 85 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 BTNL10A8MVZ5 291 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 DYNC1I1O14576 645 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 TACC1O75410 805 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 LMNAP02545 664 aaKnown RBP21.16■□□□□ 0.98
ACTN4-208ENST00000497637 MCF2P10911 925 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 GCNT1Q02742 428 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 ALKBH5Q6P6C2 394 aaKnown RBP21.16■□□□□ 0.98
ACTN4-208ENST00000497637 WDR49Q8IV35 697 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 CRIPAKQ8N1N5 446 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 VN1R2Q8NFZ6 395 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 KAT5Q92993 513 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 TATDN2Q93075 761 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 CNTNAP3BQ96NU0 1288 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 CNTNAP3Q9BZ76 1288 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 CDT1Q9H211 546 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 DNAH14Q0VDD8 3507 aa21.16■□□□□ 0.98
ACTN4-208ENST00000497637 PTPRJQ12913 1337 aa21.15■□□□□ 0.98
ACTN4-208ENST00000497637 TULP1O00294 542 aaPredicted RBP21.15■□□□□ 0.98
ACTN4-208ENST00000497637 VNN1O95497 513 aa21.15■□□□□ 0.98
ACTN4-208ENST00000497637 RPLP2P05387 115 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms