RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 SHISA7A6NL88 538 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 EIF3DO15371 548 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLDN12-213ENST00000496677 POLR2BP30876 1174 aaKnown RBP13.35□□□□□ -0.27
CLDN12-213ENST00000496677 ME1P48163 572 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 ASIC1P78348 528 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 TFAMQ00059 246 aaKnown RBP13.35□□□□□ -0.27
CLDN12-213ENST00000496677 SLC44A4Q53GD3 710 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 FAM26FQ5R3K3 315 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 IQCEQ6IPM2 695 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 ARMCX5Q6P1M9 558 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 UNC13DQ70J99 1090 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 PDZD4Q76G19 769 aaPredicted RBP13.35□□□□□ -0.27
CLDN12-213ENST00000496677 GPD1LQ8N335 351 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 ELMOD1Q8N336 334 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 LRRC52Q8N7C0 313 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 DTWD2Q8NBA8 298 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
CLDN12-213ENST00000496677 SCFD1Q8WVM8 642 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 ASB16Q96NS5 453 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 TRPV4Q9HBA0 871 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 FAM86C1Q9NVL1 165 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 GDAP2Q9NXN4 497 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 AGAP1Q9UPQ3 857 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 ASB3Q9Y575 518 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 PTPRJQ12913 1337 aa13.35□□□□□ -0.27
CLDN12-213ENST00000496677 PROB1E7EW31 1015 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 ACTN4O43707 911 aaKnown RBP13.34□□□□□ -0.27
CLDN12-213ENST00000496677 KLRC4O43908 158 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 SOAT2O75908 522 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 ITGB3P05106 788 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 MYL4P12829 197 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 GLULP15104 373 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 GJA1P17302 382 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 PNPLA4P41247 253 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 EPHB3P54753 998 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 PLD1Q13393 1074 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 SNW1Q13573 536 aaKnown RBP13.34□□□□□ -0.27
CLDN12-213ENST00000496677 CUL4BQ13620 913 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 BMT2Q1RMZ1 405 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 SV2CQ496J9 727 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 SLC39A12Q504Y0 691 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 STXBP4Q6ZWJ1 553 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 DNAJB7Q7Z6W7 309 aaPredicted RBP13.34□□□□□ -0.27
CLDN12-213ENST00000496677 METTL23Q86XA0 190 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 CBWD2Q8IUF1 395 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 PDCL2Q8N4E4 241 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 OR5B17Q8NGF7 314 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 SMARCD2Q92925 531 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 PSMG2Q969U7 264 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 CHAMP1Q96JM3 812 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 PKMYT1Q99640 499 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 MKNK1Q9BUB5 465 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 GZF1Q9H116 711 aaPredicted RBP13.34□□□□□ -0.27
CLDN12-213ENST00000496677 BLZF1Q9H2G9 400 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 ZNF334Q9HCZ1 680 aaPredicted RBP13.34□□□□□ -0.27
CLDN12-213ENST00000496677 ASAH2Q9NR71 780 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 AGPAT3Q9NRZ7 376 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 TMLHEQ9NVH6 421 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 INTS13Q9NVM9 706 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 FAM13BQ9NYF5 915 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 HSPBP1Q9NZL4 362 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 ITGA11Q9UKX5 1188 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 L1RE1Q9UN81 338 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 ZFHX2Q9C0A1 2572 aaPredicted RBP13.34□□□□□ -0.27
CLDN12-213ENST00000496677 NCANO14594 1321 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 COL4A3Q01955 1670 aa13.34□□□□□ -0.27
CLDN12-213ENST00000496677 FAM237AA0A1B0GTK4 181 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 ZNF233A6NK53 670 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 GABRDO14764 452 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 SLFN14P0C7P3 912 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 ATF6P18850 670 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 NBL1P41271 181 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 ALDH1A3P47895 512 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 SNRPFP62306 86 aaKnown RBP13.33□□□□□ -0.28
CLDN12-213ENST00000496677 RBP5P82980 135 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 PFKPQ01813 784 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 PRKCQQ04759 706 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 TEAD2Q15562 447 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 GAREM2Q75VX8 874 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 GRAMD1CQ8IYS0 662 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 ZNF687Q8N1G0 1237 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 THEM5Q8N1Q8 247 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 CSGALNACT2Q8N6G5 542 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 LEO1Q8WVC0 666 aaPredicted RBP13.33□□□□□ -0.28
CLDN12-213ENST00000496677 ATOH1Q92858 354 aaPredicted RBP13.33□□□□□ -0.28
CLDN12-213ENST00000496677 RSPRY1Q96DX4 576 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 SHDQ96IW2 340 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 FOXQ1Q9C009 403 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 GPR88Q9GZN0 384 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 IL21Q9HBE4 155 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 KIAA1586Q9HCI6 787 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 ZFP14Q9HCL3 533 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 SERTAD1Q9UHV2 236 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 HPSEQ9Y251 543 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 SIT1Q9Y3P8 196 aa13.33□□□□□ -0.28
CLDN12-213ENST00000496677 MTF2Q9Y483 593 aaPredicted RBP13.33□□□□□ -0.28
CLDN12-213ENST00000496677 DCNP07585 359 aaKnown RBP13.32□□□□□ -0.28
CLDN12-213ENST00000496677 HAPLN1P10915 354 aaPredicted RBP13.32□□□□□ -0.28
CLDN12-213ENST00000496677 CMA1P23946 247 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms