RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 OR4Q2P0C623 313 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 CPB1P15086 417 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 CMA1P23946 247 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 GSE1Q14687 1217 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 PTPAQ15257 358 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 XKR4Q5GH76 650 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 CCDC183Q5T5S1 534 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 ATF7IP2Q5U623 682 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 ZNF280DQ6N043 979 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 C1orf228Q6PIY5 440 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 RALGPS2Q86X27 583 aaPredicted RBP12.21□□□□□ -0.45
LRP8-211ENST00000496580 ARID3BQ8IVW6 561 aaPredicted RBP12.21□□□□□ -0.45
LRP8-211ENST00000496580 FAM200AQ8TCP9 573 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 CCDC34Q96HJ3 373 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 PGLYRP2Q96PD5 576 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 CDT1Q9H211 546 aa12.21□□□□□ -0.45
LRP8-211ENST00000496580 ITPR1Q14643 2758 aa12.21□□□□□ -0.46
LRP8-211ENST00000496580 PRAMEF12O95522 483 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 GRM5P41594 1212 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 NAMPTP43490 491 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 TOB1P50616 345 aaPredicted RBP12.2□□□□□ -0.46
LRP8-211ENST00000496580 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
LRP8-211ENST00000496580 ARL6IP4Q66PJ3 421 aaKnown RBP12.2□□□□□ -0.46
LRP8-211ENST00000496580 PADI6Q6TGC4 694 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 ALKAL1Q6UXT8 129 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 LEMD2Q8NC56 503 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 DDX12PQ92771 950 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 E2F7Q96AV8 911 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 SUSD3Q96L08 255 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 PYM1Q9BRP8 204 aaKnown RBP12.2□□□□□ -0.46
LRP8-211ENST00000496580 ADAM33Q9BZ11 813 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 TMEM60Q9H2L4 133 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 FAM13BQ9NYF5 915 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 NUB1Q9Y5A7 615 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 PCDHB6Q9Y5E3 794 aa12.2□□□□□ -0.46
LRP8-211ENST00000496580 SRPRBQ9Y5M8 271 aaKnown RBP12.2□□□□□ -0.46
LRP8-211ENST00000496580 ANKRD11Q6UB99 2663 aaPredicted RBP12.2□□□□□ -0.46
LRP8-211ENST00000496580 ATG2BQ96BY7 2078 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 SRRM3A6NNA2 597 aaPredicted RBP12.19□□□□□ -0.46
LRP8-211ENST00000496580 C4orf47A7E2U8 309 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 NEMFO60524 1076 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 SOAT2O75908 522 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
LRP8-211ENST00000496580 FAM160A1Q05DH4 1040 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 PLK5Q496M5 336 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 CATSPER3Q86XQ3 398 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 GATA6Q92908 595 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 CHFRQ96EP1 664 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 MTMR9Q96QG7 549 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 HHIPQ96QV1 700 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 CCDC94Q9BW85 323 aaPredicted RBP12.19□□□□□ -0.46
LRP8-211ENST00000496580 GPR88Q9GZN0 384 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 GZF1Q9H116 711 aaPredicted RBP12.19□□□□□ -0.46
LRP8-211ENST00000496580 DUSP15Q9H1R2 295 aaPredicted RBP12.19□□□□□ -0.46
LRP8-211ENST00000496580 VPS45Q9NRW7 570 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 PCDHGA5Q9Y5G8 931 aa12.19□□□□□ -0.46
LRP8-211ENST00000496580 TIMM13Q9Y5L4 95 aaPredicted RBP12.19□□□□□ -0.46
LRP8-211ENST00000496580 FASNP49327 2511 aaKnown RBP12.18□□□□□ -0.46
LRP8-211ENST00000496580 CITO14578 2027 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 PKD1L2Q7Z442 2459 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 DPYSL4O14531 572 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 DCLK1O15075 740 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 CYP11B2P19099 503 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 YARSP54577 528 aaKnown RBP12.18□□□□□ -0.46
LRP8-211ENST00000496580 ZNF445P59923 1031 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 CYP4F8P98187 520 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 ATP2C1P98194 919 aaPredicted RBP12.18□□□□□ -0.46
LRP8-211ENST00000496580 RING1Q06587 406 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 ZSCAN23Q3MJ62 389 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 ZNF568Q3ZCX4 644 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 ARHGAP29Q52LW3 1261 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 GPR158Q5T848 1215 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 SH3PXD2AQ5TCZ1 1133 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 FSTL4Q6MZW2 842 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 GAREM2Q75VX8 874 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 SYNPOQ8N3V7 929 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 TTC9BQ8N6N2 239 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 FSIP1Q8NA03 581 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 ZC3H10Q96K80 434 aaKnown RBP12.18□□□□□ -0.46
LRP8-211ENST00000496580 TMEM209Q96SK2 561 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 SMG9Q9H0W8 520 aaKnown RBP12.18□□□□□ -0.46
LRP8-211ENST00000496580 NUP62CLQ9H1M0 184 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 SLC38A7Q9NVC3 462 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 CNTN3Q9P232 1028 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 TUBGCP4Q9UGJ1 667 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 SLC8A2Q9UPR5 921 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 TNFSF13BQ9Y275 285 aa12.18□□□□□ -0.46
LRP8-211ENST00000496580 CCDC163A0A0D9SF12 145 aa12.17□□□□□ -0.46
LRP8-211ENST00000496580 LNP1A1A4G5 178 aa12.17□□□□□ -0.46
LRP8-211ENST00000496580 ARHGEF35A5YM69 484 aa12.17□□□□□ -0.46
LRP8-211ENST00000496580 RNF40O75150 1001 aa12.17□□□□□ -0.46
LRP8-211ENST00000496580 AKAP3O75969 853 aa12.17□□□□□ -0.46
LRP8-211ENST00000496580 EGFP01133 1207 aa12.17□□□□□ -0.46
LRP8-211ENST00000496580 HARSP12081 509 aaKnown RBP12.17□□□□□ -0.46
LRP8-211ENST00000496580 KCNE1P15382 129 aa12.17□□□□□ -0.46
LRP8-211ENST00000496580 GABRR2P28476 465 aa12.17□□□□□ -0.46
LRP8-211ENST00000496580 MARCKSP29966 332 aaPredicted RBP12.17□□□□□ -0.46
LRP8-211ENST00000496580 PRPHP41219 470 aa12.17□□□□□ -0.46
LRP8-211ENST00000496580 CDR1P51861 262 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms