RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 PAX3P23760 479 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 GABRR2P28476 465 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 MCM7P33993 719 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 PXNP49023 591 aaPredicted RBP14.64□□□□□ -0.07
COL1A1-209ENST00000495677 NOVA1P51513 510 aaKnown RBP14.64□□□□□ -0.07
COL1A1-209ENST00000495677 RUNX3Q13761 415 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 KARSQ15046 597 aaKnown RBP14.64□□□□□ -0.07
COL1A1-209ENST00000495677 FBXO43Q4G163 708 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 FSTL4Q6MZW2 842 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 GPIHBP1Q8IV16 184 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 DAW1Q8N136 415 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 CHFRQ96EP1 664 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 PGLYRP2Q96PD5 576 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 TSPAN18Q96SJ8 248 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 GKN1Q9NS71 199 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 KCNG1Q9UIX4 513 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 STK24Q9Y6E0 443 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 MYO18AQ92614 2054 aaKnown RBP14.63□□□□□ -0.07
COL1A1-209ENST00000495677 CCDC169A6NNP5 214 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 C4orf47A7E2U8 309 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 TOM1L1O75674 476 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 PRAMEF12O95522 483 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 CAVIN2O95810 425 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 OR4Q2P0C623 313 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 OR52Z1P0C646 297 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 HOXB3P14651 431 aaPredicted RBP14.63□□□□□ -0.07
COL1A1-209ENST00000495677 DRD1P21728 446 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 CDC25CP30307 473 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 TUFMP49411 452 aaKnown RBP14.63□□□□□ -0.07
COL1A1-209ENST00000495677 DMP1Q13316 513 aaPredicted RBP14.63□□□□□ -0.07
COL1A1-209ENST00000495677 PDIA5Q14554 519 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 ANKRD1Q15327 319 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 ELF2Q15723 593 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 SYT13Q7L8C5 426 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 USP37Q86T82 979 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 ATAD1Q8NBU5 361 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 GATA6Q92908 595 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 ZBTB45Q96K62 511 aaPredicted RBP14.63□□□□□ -0.07
COL1A1-209ENST00000495677 EDEM2Q9BV94 578 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 ADAM33Q9BZ11 813 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 SMOC1Q9H4F8 434 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 IL21Q9HBE4 155 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 HPS4Q9NQG7 708 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 KMT5AQ9NQR1 393 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 SLC27A5Q9Y2P5 690 aa14.63□□□□□ -0.07
COL1A1-209ENST00000495677 GON4LQ3T8J9 2241 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 TTC26A0AVF1 554 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 GIPC1O14908 333 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 DTNBO60941 627 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL1A1-209ENST00000495677 MCL1Q07820 350 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 ZNF252P-AS1Q0IIN9 211 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 ZPBP2Q6X784 338 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 C11orf74Q86VG3 221 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 CMTM8Q8IZV2 173 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 EXOC4Q96A65 974 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 DRC1Q96MC2 740 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 SLC46A2Q9BY10 475 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 TUBGCP4Q9UGJ1 667 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 UBQLN1Q9UMX0 589 aaKnown RBP14.62□□□□□ -0.07
COL1A1-209ENST00000495677 KIAA1024Q9UPX6 916 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 TIMM13Q9Y5L4 95 aaPredicted RBP14.62□□□□□ -0.07
COL1A1-209ENST00000495677 ADAMTS20P59510 1910 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 DMXL2Q8TDJ6 3036 aa14.62□□□□□ -0.07
COL1A1-209ENST00000495677 IGF2RP11717 2491 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 HELZP42694 1942 aaKnown RBP14.61□□□□□ -0.07
COL1A1-209ENST00000495677 LNP1A1A4G5 178 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 OTOL1A6NHN0 477 aaPredicted RBP14.61□□□□□ -0.07
COL1A1-209ENST00000495677 SRRM3A6NNA2 597 aaPredicted RBP14.61□□□□□ -0.07
COL1A1-209ENST00000495677 CDX4O14627 284 aaPredicted RBP14.61□□□□□ -0.07
COL1A1-209ENST00000495677 RNF40O75150 1001 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 ADRB2P07550 413 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 CCT6AP40227 531 aaKnown RBP14.61□□□□□ -0.07
COL1A1-209ENST00000495677 SMARCB1Q12824 385 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 MAPK7Q13164 816 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 TRIM29Q14134 588 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 NOLC1Q14978 699 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL1A1-209ENST00000495677 SH3PXD2AQ5TCZ1 1133 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 OVOS1Q6IE37 1185 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 TCEAL6Q6IPX3 200 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 ARMCX5Q6P1M9 558 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 LRSAM1Q6UWE0 723 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 NSUN7Q8NE18 718 aaKnown RBP14.61□□□□□ -0.07
COL1A1-209ENST00000495677 KCNN1Q92952 543 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 TCEAL3Q969E4 200 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 TIPINQ9BVW5 301 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 KIF9Q9HAQ2 790 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 TBX20Q9UMR3 447 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 ZFYVE26Q68DK2 2539 aa14.61□□□□□ -0.07
COL1A1-209ENST00000495677 CLDN3O15551 220 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 XPOTO43592 962 aaKnown RBP14.6□□□□□ -0.07
COL1A1-209ENST00000495677 HIP1RO75146 1068 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 LARGE1O95461 756 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 EGFP01133 1207 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 CYP11A1P05108 521 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 CLTAP09496 248 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 DDX6P26196 483 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL1A1-209ENST00000495677 GALK1P51570 392 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 LILRA4P59901 499 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 CREB5Q02930 508 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms