RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 PPP3CAQ08209 521 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 GPR17Q13304 367 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 ZACNQ401N2 412 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 LIN9Q5TKA1 542 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 TPGS2Q68CL5 300 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 KLHL10Q6JEL2 608 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 SV2AQ7L0J3 742 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 LRRTM3Q86VH5 581 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 TCEAL8Q8IYN2 117 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 KBTBD7Q8WVZ9 684 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 SMG7Q92540 1137 aaKnown RBP18.4■□□□□ 0.54
SNX17-209ENST00000494893 RIPOR3Q96MK2 946 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 MED15Q96RN5 788 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 MKNK1Q9BUB5 465 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 ZCWPW1Q9H0M4 648 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 AFF4Q9UHB7 1163 aaKnown RBP18.4■□□□□ 0.54
SNX17-209ENST00000494893 DSEQ9UL01 958 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 NME7Q9Y5B8 376 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 MTCL1Q9Y4B5 1905 aaKnown RBP18.4■□□□□ 0.54
SNX17-209ENST00000494893 C2orf16Q68DN1 1984 aa18.4■□□□□ 0.54
SNX17-209ENST00000494893 DENND4AQ7Z401 1863 aa18.39■□□□□ 0.54
SNX17-209ENST00000494893 CUL9Q8IWT3 2517 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 SPDYE4A6NLX3 237 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 GABRDO14764 452 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 PSMA7O14818 248 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 CETN3O15182 167 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 CCL16O15467 120 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 STAU1O95793 577 aaKnown RBP18.39■□□□□ 0.53
SNX17-209ENST00000494893 HNRNPA1P09651 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
SNX17-209ENST00000494893 CCDC192P0DO97 292 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 HOXA9P31269 272 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 CDR1P51861 262 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 AP3M2P53677 418 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 LRRC63Q05C16 580 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 ADCY1Q08828 1119 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 CCDC142Q17RM4 750 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 UVSSAQ2YD98 709 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 PPM1LQ5SGD2 360 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 ATAT1Q5SQI0 421 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 INTS8Q75QN2 995 aaKnown RBP18.39■□□□□ 0.53
SNX17-209ENST00000494893 GJD3Q8N144 294 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 TTC9BQ8N6N2 239 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 TOP6BLQ8N6T0 577 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 TRIML1Q8N9V2 468 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 NELFBQ8WX92 580 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 NECTIN4Q96NY8 510 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 PGLYRP2Q96PD5 576 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 OXCT2Q9BYC2 517 aaPredicted RBP18.39■□□□□ 0.53
SNX17-209ENST00000494893 CTNND2Q9UQB3 1225 aa18.39■□□□□ 0.53
SNX17-209ENST00000494893 ARHGEF37A1IGU5 675 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 MTMR11A4FU01 709 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 IKBKBO14920 756 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 HUS1O60921 280 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 N4BP1O75113 896 aaKnown RBP18.38■□□□□ 0.53
SNX17-209ENST00000494893 LRRN2O75325 713 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 SP100P23497 879 aaPredicted RBP18.38■□□□□ 0.53
SNX17-209ENST00000494893 GCLMP48507 274 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 NTHL1P78549 312 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 FKBP3Q00688 224 aaKnown RBP18.38■□□□□ 0.53
SNX17-209ENST00000494893 TYRO3Q06418 890 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 ENPEPQ07075 957 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 MYO1EQ12965 1108 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 BIRC3Q13489 604 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 ELMSAN1Q6PJG2 1045 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 CYP26C1Q6V0L0 522 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 METTL23Q86XA0 190 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 ATAD1Q8NBU5 361 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 RPGRIP1Q96KN7 1286 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 PKMYT1Q99640 499 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 TSG101Q99816 390 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 VRTNQ9H8Y1 702 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 CYP4F11Q9HBI6 524 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 WDR6Q9NNW5 1121 aaKnown RBP18.38■□□□□ 0.53
SNX17-209ENST00000494893 TMLHEQ9NVH6 421 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 HCFC1R1Q9NWW0 138 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 POLIQ9UNA4 740 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 INSL5Q9Y5Q6 135 aa18.38■□□□□ 0.53
SNX17-209ENST00000494893 C2CD4DB7Z1M9 353 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 SLC16A3O15427 465 aaKnown RBP18.37■□□□□ 0.53
SNX17-209ENST00000494893 POU2F2P09086 479 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 ACAT1P24752 427 aaKnown RBP18.37■□□□□ 0.53
SNX17-209ENST00000494893 PPP1R2P41236 205 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 STX17P56962 302 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 STIM1Q13586 685 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 NCOA4Q13772 614 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 FOXR2Q6PJQ5 311 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 CCDC149Q6ZUS6 474 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 ADGRF2Q8IZF7 708 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 TMEM86AQ8N2M4 240 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 MRPL45Q9BRJ2 306 aaKnown RBP18.37■□□□□ 0.53
SNX17-209ENST00000494893 TSPY26PQ9H489 355 aa18.37■□□□□ 0.53
SNX17-209ENST00000494893 DDX43Q9NXZ2 648 aaKnown RBP18.37■□□□□ 0.53
SNX17-209ENST00000494893 PRRG1O14668 218 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 CLUHO75153 1309 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 PHACTR2O75167 634 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 HLA-DRAP01903 254 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 EPB41P11171 864 aaKnown RBP18.36■□□□□ 0.53
SNX17-209ENST00000494893 KRT13P13646 458 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 LMO2P25791 158 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 ATICP31939 592 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms