RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 SCAMP5Q8TAC9 235 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 KCNN1Q92952 543 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 ZNF764Q96H86 408 aaPredicted RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 COX4I2Q96KJ9 171 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 YTHDC1Q96MU7 727 aaKnown RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 VRK1Q99986 396 aaPredicted RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 NOL10Q9BSC4 688 aaKnown RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 HDAC8Q9BY41 377 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 DPH1Q9BZG8 443 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 SEMA6BQ9H3T3 888 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 RBM12Q9NTZ6 932 aaKnown RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 CPSF2Q9P2I0 782 aaKnown RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 C7orf72A4D263 438 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 TMEM110-MUSTN1A8MSY1 372 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 F8W031 263 aaPredicted RBP7.39□□□□□ -1.23
SNX13-210ENST00000494402 TAF4O00268 1085 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 CAPN9O14815 690 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 NPHS1O60500 1241 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 ADAM11O75078 769 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 TBX10O75333 385 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 CCDC159P0C7I6 412 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 FTH1P19P0C7X4 201 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 PSMB10P40306 273 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 PAFAH1B1P43034 410 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 FLT3LGP49771 235 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 GALK1P51570 392 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 AKAP17AQ02040 695 aaKnown RBP7.39□□□□□ -1.23
SNX13-210ENST00000494402 PPP3CAQ08209 521 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 SCAPQ12770 1279 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 TMED1Q13445 227 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 TRIM71Q2Q1W2 868 aaKnown RBP7.39□□□□□ -1.23
SNX13-210ENST00000494402 BMP2KLQ5H9B9 411 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 DEPDC1Q5TB30 811 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 PRAMEF9Q5VWM5 478 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 USP17L6PQ6QN14 398 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 CYP20A1Q6UW02 462 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.39□□□□□ -1.23
SNX13-210ENST00000494402 Q8N1Y9 231 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 MIGA1Q8NAN2 632 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 GLB1L3Q8NCI6 653 aaPredicted RBP7.39□□□□□ -1.23
SNX13-210ENST00000494402 UHMK1Q8TAS1 419 aaKnown RBP7.39□□□□□ -1.23
SNX13-210ENST00000494402 PIP4K2CQ8TBX8 421 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 DENND1AQ8TEH3 1009 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 BCL7CQ8WUZ0 217 aaPredicted RBP7.39□□□□□ -1.23
SNX13-210ENST00000494402 ZNF606Q8WXB4 792 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 MAML1Q92585 1016 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 EXOC4Q96A65 974 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 PTCHD1Q96NR3 888 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 DMRTA2Q96SC8 542 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 RBM15Q96T37 977 aaKnown RBP eCLIP7.39□□□□□ -1.23
SNX13-210ENST00000494402 MKNK2Q9HBH9 465 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 TBC1D23Q9NUY8 699 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 BTG4Q9NY30 223 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 CALCOCO1Q9P1Z2 691 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 COA3Q9Y2R0 106 aaPredicted RBP7.39□□□□□ -1.23
SNX13-210ENST00000494402 DERAQ9Y315 318 aa7.39□□□□□ -1.23
SNX13-210ENST00000494402 MYPNQ86TC9 1320 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 KRIT1O00522 736 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 FGF10O15520 208 aaPredicted RBP7.38□□□□□ -1.23
SNX13-210ENST00000494402 USP2O75604 605 aaPredicted RBP7.38□□□□□ -1.23
SNX13-210ENST00000494402 USP1O94782 785 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 CSPG5O95196 566 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 ZNF205O95201 554 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 GLP2RO95838 553 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 F9P00740 461 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 C4BPAP04003 597 aaKnown RBP7.38□□□□□ -1.23
SNX13-210ENST00000494402 LAG3P18627 525 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 MAPK3P27361 379 aaPredicted RBP7.38□□□□□ -1.23
SNX13-210ENST00000494402 GRK5P34947 590 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 PGM1P36871 562 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 PPP5CP53041 499 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 RCAN1P53805 252 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 BCAT1P54687 386 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 MLLT6P55198 1093 aaPredicted RBP7.38□□□□□ -1.23
SNX13-210ENST00000494402 ZNF200P98182 395 aaPredicted RBP7.38□□□□□ -1.23
SNX13-210ENST00000494402 SLC13A2Q13183 592 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 RAB39AQ14964 217 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 CHRNA2Q15822 529 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 MAPKAPK3Q16644 382 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 C2orf76Q3KRA6 126 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 ANKDD1AQ495B1 522 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 SHQ1Q6PI26 577 aaKnown RBP7.38□□□□□ -1.23
SNX13-210ENST00000494402 KCTD1Q719H9 257 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 LRRC8DQ7L1W4 858 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 DYMQ7RTS9 669 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 ZNF804AQ7Z570 1209 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 MICU3Q86XE3 530 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 WFDC8Q8IUA0 241 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 TBC1D21Q8IYX1 336 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 ZNF540Q8NDQ6 660 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 SH3RF3Q8TEJ3 882 aaPredicted RBP7.38□□□□□ -1.23
SNX13-210ENST00000494402 DEPDC1BQ8WUY9 529 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 GTPBP3Q969Y2 492 aaKnown RBP7.38□□□□□ -1.23
SNX13-210ENST00000494402 BICD1Q96G01 975 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 APOPT1Q96IL0 206 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 CABS1Q96KC9 395 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 GBP5Q96PP8 586 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 CITED2Q99967 270 aaPredicted RBP7.38□□□□□ -1.23
SNX13-210ENST00000494402 TMPRSS13Q9BYE2 586 aa7.38□□□□□ -1.23
SNX13-210ENST00000494402 ZNF518BQ9C0D4 1074 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms