RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 EPHX3Q9H6B9 360 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 TNFRSF12AQ9NP84 129 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 CHD7Q9P2D1 2997 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 PPARGC1AQ9UBK2 798 aaKnown RBP6.03□□□□□ -1.44
PTCD3-219ENST00000494323 RCAN3Q9UKA8 241 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 Q9Y3F1 56 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 TNKSO95271 1327 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 FRMPD2Q68DX3 1309 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-219ENST00000494323 REV3LO60673 3130 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 ALG1L2C9J202 215 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 NFIBO00712 420 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 FOXP2O15409 715 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 PLA2G6O60733 806 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 ICAM1P05362 532 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 SUPT20HL2P0C7V6 817 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 SRGAP2CP0DJJ0 459 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 GLI4P10075 376 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 ERVFRD-1P60508 538 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 PURAQ00577 322 aaKnown RBP6.02□□□□□ -1.45
PTCD3-219ENST00000494323 STRN3Q13033 797 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 CCDC96Q2M329 555 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 SKOR2Q2VWA4 1001 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-219ENST00000494323 RRP12Q5JTH9 1297 aaKnown RBP6.02□□□□□ -1.45
PTCD3-219ENST00000494323 WWC2Q6AWC2 1192 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 TMCO2Q7Z6W1 182 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-219ENST00000494323 DCP2Q8IU60 420 aaKnown RBP6.02□□□□□ -1.45
PTCD3-219ENST00000494323 ARNTL2Q8WYA1 636 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 DIRC2Q96SL1 478 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 MTG1Q9BT17 334 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-219ENST00000494323 FSD1Q9BTV5 496 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 CELF4Q9BZC1 486 aaKnown RBP6.02□□□□□ -1.45
PTCD3-219ENST00000494323 SLC6A17Q9H1V8 727 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 NSUN3Q9H649 340 aaKnown RBP6.02□□□□□ -1.45
PTCD3-219ENST00000494323 VTA1Q9NP79 307 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 TOMM22Q9NS69 142 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 SYNPO2Q9UMS6 1093 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 MTCH2Q9Y6C9 303 aa6.02□□□□□ -1.45
PTCD3-219ENST00000494323 MYO7AQ13402 2215 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 CCDC66A2RUB6 948 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 NTRK1P04629 796 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 CYBBP04839 570 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 MPOP05164 745 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 CKMP06732 381 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 IQCF3P0C7M6 154 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 TXNP10599 105 aaKnown RBP6.01□□□□□ -1.45
PTCD3-219ENST00000494323 GNAT1P11488 350 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 ACTN1P12814 892 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 BPIP17213 487 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 SLC6A11P48066 632 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 CPT1AP50416 773 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 ALDH5A1P51649 535 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-219ENST00000494323 NEK4P51957 841 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 TAP1Q03518 808 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 STAT4Q14765 748 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 NR1I3Q14994 352 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 ODR4Q5SWX8 454 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 PIK3R6Q5UE93 754 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 VPS53Q5VIR6 699 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 PAQR3Q6TCH7 311 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 RNF207Q6ZRF8 634 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 SYDE1Q6ZW31 735 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-219ENST00000494323 CHST3Q7LGC8 479 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 FBXO15Q8NCQ5 510 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-219ENST00000494323 OR6J1Q8NGC5 347 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 MORC4Q8TE76 937 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 TBC1D5Q92609 795 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 FAM122AQ96E09 287 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 INTS4Q96HW7 963 aaKnown RBP6.01□□□□□ -1.45
PTCD3-219ENST00000494323 KCNJ15Q99712 375 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 TMEM47Q9BQJ4 181 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 JAM3Q9BX67 310 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 SEZ6LQ9BYH1 1024 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 CATSPERZQ9NTU4 200 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 SAMD15Q9P1V8 674 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 FBLN5Q9UBX5 448 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 ADD3Q9UEY8 706 aaKnown RBP6.01□□□□□ -1.45
PTCD3-219ENST00000494323 NUDT5Q9UKK9 219 aa6.01□□□□□ -1.45
PTCD3-219ENST00000494323 G3BP2Q9UN86 482 aaKnown RBP6.01□□□□□ -1.45
PTCD3-219ENST00000494323 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.01□□□□□ -1.45
PTCD3-219ENST00000494323 KIF28PB7ZC32 967 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 CBX4O00257 560 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 KRIT1O00522 736 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 ERC2O15083 957 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 GPR39O43194 453 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 MAFKO60675 156 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 TSPAN15O95858 294 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 FGAP02671 866 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 DBHP09172 617 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 GOLGA8HP0CJ92 632 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 PLA2G5P39877 138 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 RAP1GAPP47736 663 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 DNM2P50570 870 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 GALK1P51570 392 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 RPS6P62753 249 aaKnown RBP6□□□□□ -1.45
PTCD3-219ENST00000494323 TMEM62Q0P6H9 643 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 GPNMBQ14956 572 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 CRY1Q16526 586 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 PTGISQ16647 500 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 LY6KQ17RY6 165 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 AAK1Q2M2I8 961 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms