RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 GABRR2P28476 465 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 MARCKSP29966 332 aaPredicted RBP14.4□□□□□ -0.1
USF1-206ENST00000491629 EPHB3P54753 998 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 CYP4F8P98187 520 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 MCL1Q07820 350 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 PDIA5Q14554 519 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 ARHGAP29Q52LW3 1261 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 GPR158Q5T848 1215 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 STPG1Q5TH74 334 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 IL31Q6EBC2 164 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 FSTL4Q6MZW2 842 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 C1orf228Q6PIY5 440 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 SYNPOQ8N3V7 929 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 RIN3Q8TB24 985 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 SNX29Q8TEQ0 813 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 GAB3Q8WWW8 586 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 LPIN3Q9BQK8 851 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 ATXN3LQ9H3M9 355 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 HPS4Q9NQG7 708 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 OBP2AQ9NY56 170 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 RBM19Q9Y4C8 960 aaKnown RBP14.4□□□□□ -0.1
USF1-206ENST00000491629 TNRC6BQ9UPQ9 1833 aaKnown RBP14.4□□□□□ -0.1
USF1-206ENST00000491629 LAMA5O15230 3695 aa14.4□□□□□ -0.1
USF1-206ENST00000491629 MYOFQ9NZM1 2061 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 MAPTP10636 758 aaKnown RBP14.39□□□□□ -0.11
USF1-206ENST00000491629 ATF6P18850 670 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 WEE1P30291 646 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 RAD51AP2Q09MP3 1159 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 NAIF1Q69YI7 327 aaPredicted RBP14.39□□□□□ -0.11
USF1-206ENST00000491629 TCEAL6Q6IPX3 200 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 TMEM150AQ86TG1 271 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 OR10T2Q8NGX3 314 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 DDX1Q92499 740 aaKnown RBP14.39□□□□□ -0.11
USF1-206ENST00000491629 TCEAL3Q969E4 200 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 LOXL4Q96JB6 756 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 DRC1Q96MC2 740 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 FAM83CQ9BQN1 747 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 ANP32EQ9BTT0 268 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 SLC46A2Q9BY10 475 aa14.39□□□□□ -0.11
USF1-206ENST00000491629 FOXP1Q9H334 677 aaPredicted RBP14.39□□□□□ -0.11
USF1-206ENST00000491629 FBRSL1Q9HCM7 1045 aaKnown RBP14.39□□□□□ -0.11
USF1-206ENST00000491629 ANKRD11Q6UB99 2663 aaPredicted RBP14.38□□□□□ -0.11
USF1-206ENST00000491629 OR6C75A6NL08 312 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 LACTBL1A8MY62 500 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 FOXD2O60548 495 aaPredicted RBP14.38□□□□□ -0.11
USF1-206ENST00000491629 RPP40O75818 363 aaKnown RBP14.38□□□□□ -0.11
USF1-206ENST00000491629 KCNK5O95279 499 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 TYMPP19971 482 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 CYP3A5P20815 502 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 ALDH1A3P47895 512 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 PLD1Q13393 1074 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 MYBPC2Q14324 1141 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 ENOX2Q16206 610 aaKnown RBP14.38□□□□□ -0.11
USF1-206ENST00000491629 TMEM196Q5HYL7 178 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 OVOS1Q6IE37 1185 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 CACNA2D4Q7Z3S7 1137 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 BPIFB1Q8TDL5 484 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 SPIRE2Q8WWL2 714 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 KIF12Q96FN5 646 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 LSM14BQ9BX40 385 aaKnown RBP14.38□□□□□ -0.11
USF1-206ENST00000491629 TASP1Q9H6P5 420 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 C17orf75Q9HAS0 396 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 PLEKHA5Q9HAU0 1116 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 DNM3Q9UQ16 869 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 CCL26Q9Y258 94 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 ASB3Q9Y575 518 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 PCDHB6Q9Y5E3 794 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 CEP192Q8TEP8 1941 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 CACNA1EQ15878 2313 aa14.38□□□□□ -0.11
USF1-206ENST00000491629 MYO18AQ92614 2054 aaKnown RBP14.37□□□□□ -0.11
USF1-206ENST00000491629 CCDC163A0A0D9SF12 145 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 DPYSL4O14531 572 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 ADRB2P07550 413 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 GUCY2CP25092 1073 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 NEK4P51957 841 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 LILRA4P59901 499 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 SAFBQ15424 915 aaKnown RBP eCLIP14.37□□□□□ -0.11
USF1-206ENST00000491629 ITPRIPL2Q3MIP1 535 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 TRIM68Q6AZZ1 485 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 ZPBP2Q6X784 338 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 FBXO18Q8NFZ0 1043 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 FAM200AQ8TCP9 573 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 EZH1Q92800 747 aaPredicted RBP14.37□□□□□ -0.11
USF1-206ENST00000491629 C8orf76Q96K31 380 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 ZC3H10Q96K80 434 aaKnown RBP14.37□□□□□ -0.11
USF1-206ENST00000491629 SENP8Q96LD8 212 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 PNMA5Q96PV4 448 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 OXCT2Q9BYC2 517 aaPredicted RBP14.37□□□□□ -0.11
USF1-206ENST00000491629 GKN1Q9NS71 199 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 UBQLN1Q9UMX0 589 aaKnown RBP14.37□□□□□ -0.11
USF1-206ENST00000491629 WASF3Q9UPY6 502 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 ADAMTS9Q9P2N4 1935 aa14.37□□□□□ -0.11
USF1-206ENST00000491629 ITPR1Q14643 2758 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 NPHP3-ACAD11A0A0J9YXS1 232 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 TRDMT1O14717 391 aaKnown RBP14.36□□□□□ -0.11
USF1-206ENST00000491629 GIPC1O14908 333 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 DCLK1O15075 740 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 CLDN3O15551 220 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 EGFP01133 1207 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 CLTAP09496 248 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms