RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 HOXD13P35453 343 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 PNPLA4P41247 253 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 AMPD3Q01432 767 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 TEAD2Q15562 447 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 STXBP4Q6ZWJ1 553 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 FRMD5Q7Z6J6 570 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 THEM5Q8N1Q8 247 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 CXorf38Q8TB03 319 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 KCNG4Q8TDN1 519 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 CACTINQ8WUQ7 758 aaKnown RBP16.55■□□□□ 0.24
IMP4-216ENST00000490895 HPS3Q969F9 1004 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 PSMG2Q969U7 264 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 ZNF560Q96MR9 790 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 OSBPL6Q9BZF3 934 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 GPR88Q9GZN0 384 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 PCIF1Q9H4Z3 704 aa16.55■□□□□ 0.24
IMP4-216ENST00000490895 KIAA0391O15091 583 aaKnown RBP16.54■□□□□ 0.24
IMP4-216ENST00000490895 LRRN2O75325 713 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 SOAT2O75908 522 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 POLR2BP30876 1174 aaKnown RBP16.54■□□□□ 0.24
IMP4-216ENST00000490895 TUFMP49411 452 aaKnown RBP16.54■□□□□ 0.24
IMP4-216ENST00000490895 ASIC1P78348 528 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 SMARCB1Q12824 385 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 GRM2Q14416 872 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 FOXD4L6Q3SYB3 417 aaPredicted RBP16.54■□□□□ 0.24
IMP4-216ENST00000490895 SLC39A12Q504Y0 691 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 ATL3Q6DD88 541 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 VITQ6UXI7 678 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 FOXD4L3Q6VB84 417 aaPredicted RBP16.54■□□□□ 0.24
IMP4-216ENST00000490895 EPM2AIP1Q7L775 607 aaPredicted RBP16.54■□□□□ 0.24
IMP4-216ENST00000490895 ASCL5Q7RTU5 278 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 DNAJB7Q7Z6W7 309 aaPredicted RBP16.54■□□□□ 0.24
IMP4-216ENST00000490895 LRRTM3Q86VH5 581 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 GPD1LQ8N335 351 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 LRRC52Q8N7C0 313 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 ZSCAN18Q8TBC5 510 aaPredicted RBP16.54■□□□□ 0.24
IMP4-216ENST00000490895 DNASE1L2Q92874 299 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 C7orf25Q9BPX7 421 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 TRMT61BQ9BVS5 477 aaKnown RBP16.54■□□□□ 0.24
IMP4-216ENST00000490895 PDE11AQ9HCR9 933 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 ZNF334Q9HCZ1 680 aaPredicted RBP16.54■□□□□ 0.24
IMP4-216ENST00000490895 LTB4R2Q9NPC1 389 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 AGAP1Q9UPQ3 857 aa16.54■□□□□ 0.24
IMP4-216ENST00000490895 COL4A3Q01955 1670 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 F5P12259 2224 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 CFAP54Q96N23 3096 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 A0A1W2PRU2 124 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 PRR23AA6NEV1 266 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 EIF3DO15371 548 aaKnown RBP eCLIP16.53■□□□□ 0.24
IMP4-216ENST00000490895 ITGB3P05106 788 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 PSMC3P17980 439 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 CD72P21854 359 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 VIPR2P41587 438 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 PKP1Q13835 747 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 SCARA3Q6AZY7 606 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 TPRG1Q6ZUI0 275 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 GAREM2Q75VX8 874 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 C1orf210Q8IVY1 113 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 C2orf15Q8WU43 125 aaKnown RBP16.53■□□□□ 0.24
IMP4-216ENST00000490895 DEPDC1BQ8WUY9 529 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 FAM84AQ96KN4 292 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 SLITRK6Q9H5Y7 841 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 BRD9Q9H8M2 597 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 MAGEF1Q9HAY2 307 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 HEBP1Q9NRV9 189 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 ITGA11Q9UKX5 1188 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 PCDHA7Q9UN72 937 aa16.53■□□□□ 0.24
IMP4-216ENST00000490895 MTF2Q9Y483 593 aaPredicted RBP16.53■□□□□ 0.24
IMP4-216ENST00000490895 FAM186AA6NE01 2351 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 NCANO14594 1321 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 CACNA1IQ9P0X4 2223 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 SHISA7A6NL88 538 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 FAM170BA6NMN3 283 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 POLR2DO15514 142 aaKnown RBP16.52■□□□□ 0.24
IMP4-216ENST00000490895 FGF19O95750 216 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 ATF6P18850 670 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 ME1P48163 572 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 CDR1P51861 262 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 EHHADHQ08426 723 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 UBXN2BQ14CS0 331 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 MGAT5BQ3V5L5 792 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 FAM26FQ5R3K3 315 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 ITIH5Q86UX2 942 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 MFSD6LQ8IWD5 586 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 PDCL2Q8N4E4 241 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 CSGALNACT2Q8N6G5 542 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 ZNF507Q8TCN5 953 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 SPPL2BQ8TCT7 592 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 NOC3LQ8WTT2 800 aaKnown RBP16.52■□□□□ 0.24
IMP4-216ENST00000490895 IRF7Q92985 503 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 NKD2Q969F2 451 aaPredicted RBP16.52■□□□□ 0.24
IMP4-216ENST00000490895 E2F7Q96AV8 911 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 NELL2Q99435 816 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 SEPT5Q99719 369 aaPredicted RBP16.52■□□□□ 0.24
IMP4-216ENST00000490895 MKNK1Q9BUB5 465 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 MTMR12Q9C0I1 747 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 TRPV5Q9NQA5 729 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 GDAP2Q9NXN4 497 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 SIX4Q9UIU6 781 aa16.52■□□□□ 0.24
IMP4-216ENST00000490895 L1RE1Q9UN81 338 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms