RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 ANP32EQ9BTT0 268 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 SLC26A6Q9BXS9 759 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 ZDHHC5Q9C0B5 715 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 KIAA1683Q9H0B3 1180 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 ZSCAN16Q9H4T2 348 aaPredicted RBP5.17□□□□□ -1.58
RBM39-235ENST00000490354 TAF1DQ9H5J8 278 aaPredicted RBP5.17□□□□□ -1.58
RBM39-235ENST00000490354 ARHGEF4Q9NR80 690 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 GGA3Q9NZ52 723 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 ARHGAP28Q9P2N2 729 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 MAD2L2Q9UI95 211 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 ZNF112Q9UJU3 913 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 ZBTB21Q9ULJ3 1066 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 A0A1W2PRG0 241 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 VPS37CA5D8V6 355 aaPredicted RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 UNCXA6NJT0 531 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 KLRF2D3W0D1 207 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 F5H6K3 240 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 DTNBO60941 627 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 PLEKHA8P1O95397 391 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 BAG4O95429 457 aaKnown RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 HMGCRP04035 888 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 FGFR1P11362 822 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 PABPC1P11940 636 aaKnown RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 XBP1P17861 261 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 PTPN1P18031 435 aaKnown RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 RPS19P39019 145 aaKnown RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 ADCY8P40145 1251 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 KCNQ1P51787 676 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 NANOS3P60323 173 aaKnown RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 IL13RA1P78552 427 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 KLRC3Q07444 240 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 ZNF543Q08ER8 600 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 TUBA3CQ13748 450 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 TRIM29Q14134 588 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 PFKFB3Q16875 520 aaPredicted RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 SHROOM1Q2M3G4 852 aaPredicted RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 ASPRV1Q53RT3 343 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 GPATCH4Q5T3I0 446 aaKnown RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 ATL3Q6DD88 541 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 TUBA3EQ6PEY2 450 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 NSMFQ6X4W1 530 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 LDLRAD3Q86YD5 345 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 LRRC47Q8N1G4 583 aaKnown RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 HNRNPLLQ8WVV9 542 aaKnown RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 SGSM3Q96HU1 749 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 C8orf76Q96K31 380 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 ALG1Q9BT22 464 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 SPZ1Q9BXG8 430 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 RIOX1Q9H6W3 641 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 SH2D4AQ9H788 454 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 MMRN2Q9H8L6 949 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 TLR9Q9NR96 1032 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 RIC8BQ9NVN3 520 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 PUF60Q9UHX1 559 aaKnown RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 SCAF8Q9UPN6 1271 aaKnown RBP5.16□□□□□ -1.58
RBM39-235ENST00000490354 TMX2Q9Y320 296 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 TIAM2Q8IVF5 1701 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 A0A1B0GUL6 1792 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 DLEC1Q9Y238 1755 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 DOCK2Q92608 1830 aa5.16□□□□□ -1.58
RBM39-235ENST00000490354 CYTH3O43739 400 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 PLA2G6O60733 806 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 NDUFB10O96000 172 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 ADH4P08319 380 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 GOLGA8HP0CJ92 632 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 SCG2P13521 617 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 VEGFAP15692 232 aaPredicted RBP5.15□□□□□ -1.59
RBM39-235ENST00000490354 PTMSP20962 102 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 MSX2P35548 267 aaPredicted RBP5.15□□□□□ -1.59
RBM39-235ENST00000490354 SLC1A4P43007 532 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 RESTQ13127 1097 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 SAFBQ15424 915 aaKnown RBP eCLIP5.15□□□□□ -1.59
RBM39-235ENST00000490354 SLC35G1Q2M3R5 365 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 KRT40Q6A162 431 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 OTUD7BQ6GQQ9 843 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 GALNT17Q6IS24 598 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 BTNL9Q6UXG8 535 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 USP30Q70CQ3 517 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 KRT26Q7Z3Y9 468 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 BRAPQ7Z569 592 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 SCYL3Q8IZE3 742 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.15□□□□□ -1.595e-11■■■□□ 15.1
RBM39-235ENST00000490354 ACER1Q8TDN7 264 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 LARP4BQ92615 738 aaKnown RBP5.15□□□□□ -1.59
RBM39-235ENST00000490354 MTMR8Q96EF0 704 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 VCPKMTQ9H867 229 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 SH3GLB2Q9NR46 395 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 SRPK3Q9UPE1 567 aa5.15□□□□□ -1.59
RBM39-235ENST00000490354 ADM5C9JUS6 153 aa5.14□□□□□ -1.59
RBM39-235ENST00000490354 UBE2Q2LH0YL09 131 aa5.14□□□□□ -1.59
RBM39-235ENST00000490354 GOLGA6L22H0YM25 854 aa5.14□□□□□ -1.59
RBM39-235ENST00000490354 hCG_1984214I3L0E3 225 aa5.14□□□□□ -1.59
RBM39-235ENST00000490354 MMP1P03956 469 aa5.14□□□□□ -1.59
RBM39-235ENST00000490354 PTGS1P23219 599 aa5.14□□□□□ -1.59
RBM39-235ENST00000490354 U2AF2P26368 475 aaKnown RBP eCLIP5.14□□□□□ -1.593e-8■■■□□ 16.1
RBM39-235ENST00000490354 MC4RP32245 332 aa5.14□□□□□ -1.59
RBM39-235ENST00000490354 ECE1P42892 770 aa5.14□□□□□ -1.59
RBM39-235ENST00000490354 USP14P54578 494 aa5.14□□□□□ -1.59
RBM39-235ENST00000490354 KIF23Q02241 960 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms